Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SND1-IT1Q9HBX3 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
SND1-IT1Q9HBX3 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SND1-IT1Q9HBX3 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SND1-IT1Q9HBX3 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SND1-IT1Q9HBX3 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SND1-IT1Q9HBX3 MIR6090-201ENST00000622481 60 ntBASIC16.15■□□□□ 0.18
SND1-IT1Q9HBX3 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SND1-IT1Q9HBX3 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SND1-IT1Q9HBX3 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SND1-IT1Q9HBX3 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC16.14■□□□□ 0.18
SND1-IT1Q9HBX3 AC142381.3-201ENST00000568208 1670 ntBASIC16.14■□□□□ 0.18
SND1-IT1Q9HBX3 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SND1-IT1Q9HBX3 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SND1-IT1Q9HBX3 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SND1-IT1Q9HBX3 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SND1-IT1Q9HBX3 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SND1-IT1Q9HBX3 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SND1-IT1Q9HBX3 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC16.14■□□□□ 0.17
SND1-IT1Q9HBX3 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SND1-IT1Q9HBX3 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SND1-IT1Q9HBX3 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SND1-IT1Q9HBX3 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
SND1-IT1Q9HBX3 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC16.13■□□□□ 0.17
SND1-IT1Q9HBX3 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SND1-IT1Q9HBX3 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SND1-IT1Q9HBX3 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SND1-IT1Q9HBX3 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
SND1-IT1Q9HBX3 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
SND1-IT1Q9HBX3 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SND1-IT1Q9HBX3 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
SND1-IT1Q9HBX3 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SND1-IT1Q9HBX3 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC16.12■□□□□ 0.17
SND1-IT1Q9HBX3 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SND1-IT1Q9HBX3 HNRNPLP2-201ENST00000568980 1570 ntBASIC16.12■□□□□ 0.17
SND1-IT1Q9HBX3 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SND1-IT1Q9HBX3 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SND1-IT1Q9HBX3 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SND1-IT1Q9HBX3 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
SND1-IT1Q9HBX3 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SND1-IT1Q9HBX3 AC142472.1-201ENST00000612013 1741 ntBASIC16.11■□□□□ 0.17
SND1-IT1Q9HBX3 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SND1-IT1Q9HBX3 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
SND1-IT1Q9HBX3 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SND1-IT1Q9HBX3 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
SND1-IT1Q9HBX3 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SND1-IT1Q9HBX3 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
SND1-IT1Q9HBX3 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SND1-IT1Q9HBX3 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
SND1-IT1Q9HBX3 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SND1-IT1Q9HBX3 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SND1-IT1Q9HBX3 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SND1-IT1Q9HBX3 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SND1-IT1Q9HBX3 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SND1-IT1Q9HBX3 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SND1-IT1Q9HBX3 SUZ12P1-203ENST00000578195 985 ntBASIC16.09■□□□□ 0.17
SND1-IT1Q9HBX3 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
SND1-IT1Q9HBX3 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SND1-IT1Q9HBX3 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC16.09■□□□□ 0.17
SND1-IT1Q9HBX3 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC16.09■□□□□ 0.17
SND1-IT1Q9HBX3 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SND1-IT1Q9HBX3 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SND1-IT1Q9HBX3 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC16.08■□□□□ 0.17
SND1-IT1Q9HBX3 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
SND1-IT1Q9HBX3 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
SND1-IT1Q9HBX3 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC16.08■□□□□ 0.17
SND1-IT1Q9HBX3 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC16.08■□□□□ 0.16
SND1-IT1Q9HBX3 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC16.08■□□□□ 0.16
SND1-IT1Q9HBX3 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC16.08■□□□□ 0.16
SND1-IT1Q9HBX3 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SND1-IT1Q9HBX3 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
SND1-IT1Q9HBX3 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC16.08■□□□□ 0.16
SND1-IT1Q9HBX3 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SND1-IT1Q9HBX3 MED17-227ENST00000640521 2047 ntTSL 5 BASIC16.07■□□□□ 0.16
SND1-IT1Q9HBX3 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SND1-IT1Q9HBX3 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SND1-IT1Q9HBX3 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SND1-IT1Q9HBX3 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SND1-IT1Q9HBX3 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC16.07■□□□□ 0.16
SND1-IT1Q9HBX3 CALM3-209ENST00000597743 577 ntTSL 4 BASIC16.07■□□□□ 0.16
SND1-IT1Q9HBX3 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC16.07■□□□□ 0.16
SND1-IT1Q9HBX3 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SND1-IT1Q9HBX3 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SND1-IT1Q9HBX3 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
SND1-IT1Q9HBX3 TMEM202-AS1-202ENST00000565181 2325 ntBASIC16.06■□□□□ 0.16
SND1-IT1Q9HBX3 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SND1-IT1Q9HBX3 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SND1-IT1Q9HBX3 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC16.06■□□□□ 0.16
SND1-IT1Q9HBX3 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SND1-IT1Q9HBX3 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC16.06■□□□□ 0.16
SND1-IT1Q9HBX3 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SND1-IT1Q9HBX3 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SND1-IT1Q9HBX3 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SND1-IT1Q9HBX3 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SND1-IT1Q9HBX3 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SND1-IT1Q9HBX3 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC16.05■□□□□ 0.16
SND1-IT1Q9HBX3 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC16.05■□□□□ 0.16
SND1-IT1Q9HBX3 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC16.05■□□□□ 0.16
SND1-IT1Q9HBX3 AC010501.1-201ENST00000606270 1962 ntBASIC16.05■□□□□ 0.16
SND1-IT1Q9HBX3 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 13 ms