Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC25.29■■□□□ 1.64
DDX47Q9H0S4 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC25.29■■□□□ 1.64
DDX47Q9H0S4 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
DDX47Q9H0S4 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
DDX47Q9H0S4 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
DDX47Q9H0S4 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC25.28■■□□□ 1.64
DDX47Q9H0S4 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
DDX47Q9H0S4 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC25.28■■□□□ 1.64
DDX47Q9H0S4 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC25.28■■□□□ 1.64
DDX47Q9H0S4 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC25.28■■□□□ 1.64
DDX47Q9H0S4 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
DDX47Q9H0S4 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
DDX47Q9H0S4 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC25.28■■□□□ 1.64
DDX47Q9H0S4 AC022211.4-201ENST00000625094 2161 ntBASIC25.28■■□□□ 1.64
DDX47Q9H0S4 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
DDX47Q9H0S4 THRA-202ENST00000394121 2260 ntTSL 2 BASIC25.27■■□□□ 1.64
DDX47Q9H0S4 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC25.27■■□□□ 1.64
DDX47Q9H0S4 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC25.27■■□□□ 1.64
DDX47Q9H0S4 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC25.27■■□□□ 1.64
DDX47Q9H0S4 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC25.26■■□□□ 1.63
DDX47Q9H0S4 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC25.26■■□□□ 1.63
DDX47Q9H0S4 AC138932.3-201ENST00000567634 1902 ntBASIC25.26■■□□□ 1.63
DDX47Q9H0S4 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC25.26■■□□□ 1.63
DDX47Q9H0S4 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC25.26■■□□□ 1.63
DDX47Q9H0S4 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC25.26■■□□□ 1.63
DDX47Q9H0S4 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC25.25■■□□□ 1.63
DDX47Q9H0S4 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC25.25■■□□□ 1.63
DDX47Q9H0S4 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
DDX47Q9H0S4 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
DDX47Q9H0S4 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
DDX47Q9H0S4 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC25.24■■□□□ 1.63
DDX47Q9H0S4 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
DDX47Q9H0S4 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
DDX47Q9H0S4 AC096887.2-201ENST00000623443 1957 ntBASIC25.24■■□□□ 1.63
DDX47Q9H0S4 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC25.23■■□□□ 1.63
DDX47Q9H0S4 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC25.23■■□□□ 1.63
DDX47Q9H0S4 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
DDX47Q9H0S4 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
DDX47Q9H0S4 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
DDX47Q9H0S4 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
DDX47Q9H0S4 DUX4L29-201ENST00000425409 679 ntBASIC25.22■■□□□ 1.63
DDX47Q9H0S4 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
DDX47Q9H0S4 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
DDX47Q9H0S4 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC25.22■■□□□ 1.63
DDX47Q9H0S4 PREB-202ENST00000406567 1910 ntTSL 5 BASIC25.22■■□□□ 1.63
DDX47Q9H0S4 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
DDX47Q9H0S4 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
DDX47Q9H0S4 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC25.21■■□□□ 1.63
DDX47Q9H0S4 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
DDX47Q9H0S4 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
DDX47Q9H0S4 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC25.21■■□□□ 1.63
DDX47Q9H0S4 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
DDX47Q9H0S4 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
DDX47Q9H0S4 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC25.2■■□□□ 1.62
DDX47Q9H0S4 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC25.2■■□□□ 1.62
DDX47Q9H0S4 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
DDX47Q9H0S4 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC25.2■■□□□ 1.62
DDX47Q9H0S4 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
DDX47Q9H0S4 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
DDX47Q9H0S4 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC25.2■■□□□ 1.62
DDX47Q9H0S4 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
DDX47Q9H0S4 AL139125.2-201ENST00000623134 1869 ntBASIC25.19■■□□□ 1.62
DDX47Q9H0S4 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
DDX47Q9H0S4 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC25.19■■□□□ 1.62
DDX47Q9H0S4 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC25.19■■□□□ 1.62
DDX47Q9H0S4 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC25.19■■□□□ 1.62
DDX47Q9H0S4 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
DDX47Q9H0S4 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
DDX47Q9H0S4 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC25.18■■□□□ 1.62
DDX47Q9H0S4 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC25.18■■□□□ 1.62
DDX47Q9H0S4 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC25.18■■□□□ 1.62
DDX47Q9H0S4 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC25.17■■□□□ 1.62
DDX47Q9H0S4 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC25.17■■□□□ 1.62
DDX47Q9H0S4 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
DDX47Q9H0S4 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
DDX47Q9H0S4 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC25.17■■□□□ 1.62
DDX47Q9H0S4 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC25.16■■□□□ 1.62
DDX47Q9H0S4 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC25.16■■□□□ 1.62
DDX47Q9H0S4 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC25.16■■□□□ 1.62
DDX47Q9H0S4 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
DDX47Q9H0S4 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC25.16■■□□□ 1.62
DDX47Q9H0S4 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
DDX47Q9H0S4 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
DDX47Q9H0S4 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
DDX47Q9H0S4 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
DDX47Q9H0S4 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
DDX47Q9H0S4 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
DDX47Q9H0S4 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
DDX47Q9H0S4 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC25.14■■□□□ 1.62
DDX47Q9H0S4 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
DDX47Q9H0S4 CHML-204ENST00000638121 920 ntTSL 2 BASIC25.14■■□□□ 1.62
DDX47Q9H0S4 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC25.13■■□□□ 1.61
DDX47Q9H0S4 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
DDX47Q9H0S4 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC25.13■■□□□ 1.61
DDX47Q9H0S4 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC25.13■■□□□ 1.61
DDX47Q9H0S4 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC25.13■■□□□ 1.61
DDX47Q9H0S4 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC25.12■■□□□ 1.61
DDX47Q9H0S4 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
DDX47Q9H0S4 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC25.12■■□□□ 1.61
DDX47Q9H0S4 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC25.12■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 165.9 ms