Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC25.25■■□□□ 1.63
CCHCR1Q8TD31 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC25.25■■□□□ 1.63
CCHCR1Q8TD31 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC25.25■■□□□ 1.63
CCHCR1Q8TD31 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
CCHCR1Q8TD31 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
CCHCR1Q8TD31 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
CCHCR1Q8TD31 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC25.24■■□□□ 1.63
CCHCR1Q8TD31 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC25.24■■□□□ 1.63
CCHCR1Q8TD31 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC25.24■■□□□ 1.63
CCHCR1Q8TD31 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
CCHCR1Q8TD31 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC25.23■■□□□ 1.63
CCHCR1Q8TD31 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC25.23■■□□□ 1.63
CCHCR1Q8TD31 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
CCHCR1Q8TD31 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
CCHCR1Q8TD31 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
CCHCR1Q8TD31 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
CCHCR1Q8TD31 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC25.23■■□□□ 1.63
CCHCR1Q8TD31 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC25.23■■□□□ 1.63
CCHCR1Q8TD31 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC25.22■■□□□ 1.63
CCHCR1Q8TD31 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
CCHCR1Q8TD31 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
CCHCR1Q8TD31 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
CCHCR1Q8TD31 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
CCHCR1Q8TD31 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
CCHCR1Q8TD31 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC25.21■■□□□ 1.63
CCHCR1Q8TD31 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
CCHCR1Q8TD31 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
CCHCR1Q8TD31 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
CCHCR1Q8TD31 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
CCHCR1Q8TD31 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
CCHCR1Q8TD31 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC25.2■■□□□ 1.62
CCHCR1Q8TD31 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC25.2■■□□□ 1.62
CCHCR1Q8TD31 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
CCHCR1Q8TD31 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
CCHCR1Q8TD31 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC25.19■■□□□ 1.62
CCHCR1Q8TD31 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
CCHCR1Q8TD31 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
CCHCR1Q8TD31 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
CCHCR1Q8TD31 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC25.19■■□□□ 1.62
CCHCR1Q8TD31 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC25.19■■□□□ 1.62
CCHCR1Q8TD31 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC25.19■■□□□ 1.62
CCHCR1Q8TD31 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC25.19■■□□□ 1.62
CCHCR1Q8TD31 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC25.19■■□□□ 1.62
CCHCR1Q8TD31 LTK-203ENST00000453182 2412 ntTSL 2 BASIC25.18■■□□□ 1.62
CCHCR1Q8TD31 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC25.18■■□□□ 1.62
CCHCR1Q8TD31 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
CCHCR1Q8TD31 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC25.18■■□□□ 1.62
CCHCR1Q8TD31 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC25.18■■□□□ 1.62
CCHCR1Q8TD31 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC25.18■■□□□ 1.62
CCHCR1Q8TD31 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
CCHCR1Q8TD31 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC25.18■■□□□ 1.62
CCHCR1Q8TD31 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC25.17■■□□□ 1.62
CCHCR1Q8TD31 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC25.17■■□□□ 1.62
CCHCR1Q8TD31 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
CCHCR1Q8TD31 CHST11-203ENST00000547956 936 ntTSL 2 BASIC25.17■■□□□ 1.62
CCHCR1Q8TD31 MIR4449-201ENST00000578365 66 ntBASIC25.17■■□□□ 1.62
CCHCR1Q8TD31 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
CCHCR1Q8TD31 AC148477.6-201ENST00000623746 465 ntBASIC25.17■■□□□ 1.62
CCHCR1Q8TD31 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
CCHCR1Q8TD31 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
CCHCR1Q8TD31 AC010501.1-201ENST00000606270 1962 ntBASIC25.16■■□□□ 1.62
CCHCR1Q8TD31 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC25.16■■□□□ 1.62
CCHCR1Q8TD31 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
CCHCR1Q8TD31 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
CCHCR1Q8TD31 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC25.16■■□□□ 1.62
CCHCR1Q8TD31 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
CCHCR1Q8TD31 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC25.16■■□□□ 1.62
CCHCR1Q8TD31 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CCHCR1Q8TD31 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CCHCR1Q8TD31 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
CCHCR1Q8TD31 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
CCHCR1Q8TD31 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
CCHCR1Q8TD31 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
CCHCR1Q8TD31 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
CCHCR1Q8TD31 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC25.14■■□□□ 1.61
CCHCR1Q8TD31 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC25.14■■□□□ 1.61
CCHCR1Q8TD31 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC25.14■■□□□ 1.61
CCHCR1Q8TD31 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC25.14■■□□□ 1.61
CCHCR1Q8TD31 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC25.13■■□□□ 1.61
CCHCR1Q8TD31 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
CCHCR1Q8TD31 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC25.13■■□□□ 1.61
CCHCR1Q8TD31 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC25.13■■□□□ 1.61
CCHCR1Q8TD31 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC25.13■■□□□ 1.61
CCHCR1Q8TD31 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
CCHCR1Q8TD31 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC25.13■■□□□ 1.61
CCHCR1Q8TD31 MIR219A2-201ENST00000608502 1504 ntBASIC25.12■■□□□ 1.61
CCHCR1Q8TD31 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC25.12■■□□□ 1.61
CCHCR1Q8TD31 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC25.12■■□□□ 1.61
CCHCR1Q8TD31 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC25.12■■□□□ 1.61
CCHCR1Q8TD31 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CCHCR1Q8TD31 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
CCHCR1Q8TD31 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
CCHCR1Q8TD31 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
CCHCR1Q8TD31 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC25.11■■□□□ 1.61
CCHCR1Q8TD31 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC25.11■■□□□ 1.61
CCHCR1Q8TD31 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
CCHCR1Q8TD31 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CCHCR1Q8TD31 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
CCHCR1Q8TD31 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
CCHCR1Q8TD31 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC25.11■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms