Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
CRLF3Q8IUI8 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
CRLF3Q8IUI8 WHAMMP3-201ENST00000611636 1609 ntBASIC24.11■■□□□ 1.45
CRLF3Q8IUI8 MIR3648-2-201ENST00000581792 180 ntBASIC24.11■■□□□ 1.45
CRLF3Q8IUI8 CALM3-209ENST00000597743 577 ntTSL 4 BASIC24.11■■□□□ 1.45
CRLF3Q8IUI8 MIR3648-1-201ENST00000615959 180 ntBASIC24.11■■□□□ 1.45
CRLF3Q8IUI8 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC24.11■■□□□ 1.45
CRLF3Q8IUI8 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC24.1■■□□□ 1.45
CRLF3Q8IUI8 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
CRLF3Q8IUI8 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
CRLF3Q8IUI8 AC016575.1-201ENST00000607026 382 ntBASIC24.1■■□□□ 1.45
CRLF3Q8IUI8 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC24.1■■□□□ 1.45
CRLF3Q8IUI8 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC24.1■■□□□ 1.45
CRLF3Q8IUI8 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CRLF3Q8IUI8 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
CRLF3Q8IUI8 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC24.1■■□□□ 1.45
CRLF3Q8IUI8 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC24.1■■□□□ 1.45
CRLF3Q8IUI8 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC24.09■■□□□ 1.45
CRLF3Q8IUI8 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CRLF3Q8IUI8 AGPS-202ENST00000409888 815 ntTSL 4 BASIC24.09■■□□□ 1.45
CRLF3Q8IUI8 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC24.09■■□□□ 1.45
CRLF3Q8IUI8 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC24.09■■□□□ 1.45
CRLF3Q8IUI8 CR559946.2-201ENST00000623684 991 ntBASIC24.09■■□□□ 1.45
CRLF3Q8IUI8 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
CRLF3Q8IUI8 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC24.08■■□□□ 1.45
CRLF3Q8IUI8 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC24.08■■□□□ 1.45
CRLF3Q8IUI8 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC24.08■■□□□ 1.45
CRLF3Q8IUI8 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
CRLF3Q8IUI8 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC24.08■■□□□ 1.45
CRLF3Q8IUI8 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
CRLF3Q8IUI8 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC24.08■■□□□ 1.44
CRLF3Q8IUI8 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.44
CRLF3Q8IUI8 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CRLF3Q8IUI8 AC010501.1-201ENST00000606270 1962 ntBASIC24.07■■□□□ 1.44
CRLF3Q8IUI8 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CRLF3Q8IUI8 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC24.07■■□□□ 1.44
CRLF3Q8IUI8 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC24.07■■□□□ 1.44
CRLF3Q8IUI8 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
CRLF3Q8IUI8 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CRLF3Q8IUI8 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
CRLF3Q8IUI8 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
CRLF3Q8IUI8 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
CRLF3Q8IUI8 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC24.06■■□□□ 1.44
CRLF3Q8IUI8 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
CRLF3Q8IUI8 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CRLF3Q8IUI8 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
CRLF3Q8IUI8 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
CRLF3Q8IUI8 MIR639-201ENST00000384974 98 ntBASIC24.05■■□□□ 1.44
CRLF3Q8IUI8 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.44
CRLF3Q8IUI8 AC142381.3-201ENST00000568208 1670 ntBASIC24.05■■□□□ 1.44
CRLF3Q8IUI8 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC24.04■■□□□ 1.44
CRLF3Q8IUI8 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CRLF3Q8IUI8 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CRLF3Q8IUI8 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CRLF3Q8IUI8 AC110285.7-201ENST00000624417 1536 ntBASIC24.04■■□□□ 1.44
CRLF3Q8IUI8 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
CRLF3Q8IUI8 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC24.03■■□□□ 1.44
CRLF3Q8IUI8 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
CRLF3Q8IUI8 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC24.03■■□□□ 1.44
CRLF3Q8IUI8 THRA-202ENST00000394121 2260 ntTSL 2 BASIC24.03■■□□□ 1.44
CRLF3Q8IUI8 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
CRLF3Q8IUI8 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CRLF3Q8IUI8 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CRLF3Q8IUI8 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CRLF3Q8IUI8 DUX4L13-201ENST00000554103 1267 ntBASIC24.02■■□□□ 1.44
CRLF3Q8IUI8 DUX4L15-201ENST00000611059 1267 ntBASIC24.02■■□□□ 1.44
CRLF3Q8IUI8 DUX4L23-201ENST00000615195 1269 ntBASIC24.02■■□□□ 1.44
CRLF3Q8IUI8 DUX4L24-201ENST00000617576 1269 ntBASIC24.02■■□□□ 1.44
CRLF3Q8IUI8 DUX4L22-201ENST00000618238 1269 ntBASIC24.02■■□□□ 1.44
CRLF3Q8IUI8 DUX4L20-201ENST00000619712 1269 ntBASIC24.02■■□□□ 1.44
CRLF3Q8IUI8 DUX4L21-201ENST00000622058 1269 ntBASIC24.02■■□□□ 1.44
CRLF3Q8IUI8 DUX4L10-201ENST00000622460 1267 ntBASIC24.02■■□□□ 1.44
CRLF3Q8IUI8 DUX4L25-201ENST00000624915 1269 ntBASIC24.02■■□□□ 1.44
CRLF3Q8IUI8 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC24.02■■□□□ 1.44
CRLF3Q8IUI8 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC24.02■■□□□ 1.44
CRLF3Q8IUI8 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
CRLF3Q8IUI8 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
CRLF3Q8IUI8 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
CRLF3Q8IUI8 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CRLF3Q8IUI8 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CRLF3Q8IUI8 PEX7-203ENST00000541292 945 ntTSL 5 BASIC24.01■■□□□ 1.43
CRLF3Q8IUI8 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC24.01■■□□□ 1.43
CRLF3Q8IUI8 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC24.01■■□□□ 1.43
CRLF3Q8IUI8 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CRLF3Q8IUI8 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CRLF3Q8IUI8 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC24■■□□□ 1.43
CRLF3Q8IUI8 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CRLF3Q8IUI8 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CRLF3Q8IUI8 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CRLF3Q8IUI8 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CRLF3Q8IUI8 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC23.99■■□□□ 1.43
CRLF3Q8IUI8 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CRLF3Q8IUI8 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
CRLF3Q8IUI8 CHML-204ENST00000638121 920 ntTSL 2 BASIC23.99■■□□□ 1.43
CRLF3Q8IUI8 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CRLF3Q8IUI8 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
CRLF3Q8IUI8 MIR4449-201ENST00000578365 66 ntBASIC23.98■■□□□ 1.43
CRLF3Q8IUI8 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CRLF3Q8IUI8 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC23.98■■□□□ 1.43
CRLF3Q8IUI8 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms