Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
LCA10Q71F78 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LCA10Q71F78 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
LCA10Q71F78 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LCA10Q71F78 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC12.98□□□□□ -0.33
LCA10Q71F78 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LCA10Q71F78 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
LCA10Q71F78 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LCA10Q71F78 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
LCA10Q71F78 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LCA10Q71F78 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LCA10Q71F78 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
LCA10Q71F78 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LCA10Q71F78 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
LCA10Q71F78 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LCA10Q71F78 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
LCA10Q71F78 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC12.97□□□□□ -0.33
LCA10Q71F78 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LCA10Q71F78 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LCA10Q71F78 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LCA10Q71F78 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
LCA10Q71F78 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
LCA10Q71F78 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC12.96□□□□□ -0.33
LCA10Q71F78 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
LCA10Q71F78 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC12.96□□□□□ -0.33
LCA10Q71F78 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC12.96□□□□□ -0.34
LCA10Q71F78 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
LCA10Q71F78 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
LCA10Q71F78 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
LCA10Q71F78 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LCA10Q71F78 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
LCA10Q71F78 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
LCA10Q71F78 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LCA10Q71F78 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LCA10Q71F78 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
LCA10Q71F78 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LCA10Q71F78 ABCB10P4-201ENST00000566803 2184 ntBASIC12.95□□□□□ -0.34
LCA10Q71F78 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
LCA10Q71F78 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
LCA10Q71F78 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LCA10Q71F78 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LCA10Q71F78 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LCA10Q71F78 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
LCA10Q71F78 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC12.94□□□□□ -0.34
LCA10Q71F78 KLF16-203ENST00000592313 508 ntTSL 3 BASIC12.94□□□□□ -0.34
LCA10Q71F78 EFS-203ENST00000429593 2610 ntTSL 2 BASIC12.94□□□□□ -0.34
LCA10Q71F78 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC12.94□□□□□ -0.34
LCA10Q71F78 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LCA10Q71F78 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LCA10Q71F78 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LCA10Q71F78 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC12.93□□□□□ -0.34
LCA10Q71F78 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
LCA10Q71F78 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LCA10Q71F78 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
LCA10Q71F78 AL133380.1-201ENST00000506013 324 ntBASIC12.93□□□□□ -0.34
LCA10Q71F78 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LCA10Q71F78 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LCA10Q71F78 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC12.93□□□□□ -0.34
LCA10Q71F78 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LCA10Q71F78 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
LCA10Q71F78 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
LCA10Q71F78 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
LCA10Q71F78 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LCA10Q71F78 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
LCA10Q71F78 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
LCA10Q71F78 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LCA10Q71F78 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LCA10Q71F78 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
LCA10Q71F78 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC12.92□□□□□ -0.34
LCA10Q71F78 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LCA10Q71F78 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LCA10Q71F78 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LCA10Q71F78 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LCA10Q71F78 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
LCA10Q71F78 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
LCA10Q71F78 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LCA10Q71F78 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
LCA10Q71F78 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LCA10Q71F78 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
LCA10Q71F78 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LCA10Q71F78 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LCA10Q71F78 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC12.91□□□□□ -0.34
LCA10Q71F78 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LCA10Q71F78 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LCA10Q71F78 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LCA10Q71F78 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LCA10Q71F78 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
LCA10Q71F78 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
LCA10Q71F78 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LCA10Q71F78 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LCA10Q71F78 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LCA10Q71F78 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LCA10Q71F78 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC12.9□□□□□ -0.34
LCA10Q71F78 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
LCA10Q71F78 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC12.9□□□□□ -0.34
LCA10Q71F78 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
LCA10Q71F78 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.35
LCA10Q71F78 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC12.9□□□□□ -0.35
LCA10Q71F78 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LCA10Q71F78 AC010864.1-201ENST00000609407 1511 ntBASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms