Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC58Q4VC31 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC58Q4VC31 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
CCDC58Q4VC31 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC58Q4VC31 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC58Q4VC31 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC58Q4VC31 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
CCDC58Q4VC31 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
CCDC58Q4VC31 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC21.59■■□□□ 1.05
CCDC58Q4VC31 AC010501.1-201ENST00000606270 1962 ntBASIC21.58■■□□□ 1.05
CCDC58Q4VC31 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CCDC58Q4VC31 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC21.58■■□□□ 1.05
CCDC58Q4VC31 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CCDC58Q4VC31 CLDN5-201ENST00000403084 2357 ntBASIC21.58■■□□□ 1.04
CCDC58Q4VC31 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
CCDC58Q4VC31 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC58Q4VC31 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
CCDC58Q4VC31 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC21.57■■□□□ 1.04
CCDC58Q4VC31 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC21.57■■□□□ 1.04
CCDC58Q4VC31 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC58Q4VC31 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC58Q4VC31 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC58Q4VC31 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC58Q4VC31 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
CCDC58Q4VC31 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC58Q4VC31 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC21.56■■□□□ 1.04
CCDC58Q4VC31 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC58Q4VC31 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC58Q4VC31 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC58Q4VC31 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.55■■□□□ 1.04
CCDC58Q4VC31 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC58Q4VC31 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC58Q4VC31 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC58Q4VC31 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC58Q4VC31 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC58Q4VC31 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
CCDC58Q4VC31 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC58Q4VC31 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC58Q4VC31 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC58Q4VC31 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC58Q4VC31 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC58Q4VC31 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC58Q4VC31 AP006261.1-201ENST00000584783 668 ntBASIC21.54■■□□□ 1.04
CCDC58Q4VC31 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.54■■□□□ 1.04
CCDC58Q4VC31 LINC00543-201ENST00000567234 1845 ntBASIC21.54■■□□□ 1.04
CCDC58Q4VC31 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC21.54■■□□□ 1.04
CCDC58Q4VC31 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC58Q4VC31 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.53■■□□□ 1.04
CCDC58Q4VC31 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC58Q4VC31 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC58Q4VC31 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC58Q4VC31 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC58Q4VC31 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC58Q4VC31 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.53■■□□□ 1.04
CCDC58Q4VC31 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC58Q4VC31 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.52■■□□□ 1.04
CCDC58Q4VC31 ERN1-208ENST00000606895 2068 ntBASIC21.52■■□□□ 1.04
CCDC58Q4VC31 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
CCDC58Q4VC31 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC58Q4VC31 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC58Q4VC31 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC58Q4VC31 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC21.52■■□□□ 1.04
CCDC58Q4VC31 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC58Q4VC31 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC58Q4VC31 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC58Q4VC31 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC58Q4VC31 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC58Q4VC31 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC58Q4VC31 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC58Q4VC31 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
CCDC58Q4VC31 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCDC58Q4VC31 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCDC58Q4VC31 RPS2-210ENST00000530225 765 ntTSL 2 BASIC21.5■■□□□ 1.03
CCDC58Q4VC31 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CCDC58Q4VC31 AC142381.3-201ENST00000568208 1670 ntBASIC21.5■■□□□ 1.03
CCDC58Q4VC31 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
CCDC58Q4VC31 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC58Q4VC31 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC58Q4VC31 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCDC58Q4VC31 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.48■■□□□ 1.03
CCDC58Q4VC31 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CCDC58Q4VC31 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC58Q4VC31 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.47■■□□□ 1.03
CCDC58Q4VC31 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC58Q4VC31 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC21.47■■□□□ 1.03
CCDC58Q4VC31 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC21.47■■□□□ 1.03
CCDC58Q4VC31 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
CCDC58Q4VC31 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21.47■■□□□ 1.03
CCDC58Q4VC31 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC58Q4VC31 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC58Q4VC31 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
CCDC58Q4VC31 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC58Q4VC31 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC58Q4VC31 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC58Q4VC31 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC21.46■■□□□ 1.03
CCDC58Q4VC31 AC087741.3-201ENST00000624270 1347 ntBASIC21.46■■□□□ 1.03
CCDC58Q4VC31 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC58Q4VC31 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
CCDC58Q4VC31 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
CCDC58Q4VC31 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms