Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
AP3S2P59780 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
AP3S2P59780 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
AP3S2P59780 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.81■□□□□ 0.92
AP3S2P59780 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
AP3S2P59780 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
AP3S2P59780 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
AP3S2P59780 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.81■□□□□ 0.92
AP3S2P59780 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC20.81■□□□□ 0.92
AP3S2P59780 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
AP3S2P59780 WHAMMP3-201ENST00000611636 1609 ntBASIC20.81■□□□□ 0.92
AP3S2P59780 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
AP3S2P59780 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
AP3S2P59780 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
AP3S2P59780 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
AP3S2P59780 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
AP3S2P59780 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
AP3S2P59780 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
AP3S2P59780 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.8■□□□□ 0.92
AP3S2P59780 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
AP3S2P59780 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
AP3S2P59780 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
AP3S2P59780 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
AP3S2P59780 WHAMMP2-203ENST00000563942 1603 ntBASIC20.79■□□□□ 0.92
AP3S2P59780 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
AP3S2P59780 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
AP3S2P59780 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
AP3S2P59780 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
AP3S2P59780 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
AP3S2P59780 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
AP3S2P59780 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
AP3S2P59780 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.78■□□□□ 0.92
AP3S2P59780 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.78■□□□□ 0.92
AP3S2P59780 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.78■□□□□ 0.92
AP3S2P59780 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
AP3S2P59780 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
AP3S2P59780 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
AP3S2P59780 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
AP3S2P59780 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
AP3S2P59780 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
AP3S2P59780 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
AP3S2P59780 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
AP3S2P59780 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC20.77■□□□□ 0.92
AP3S2P59780 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
AP3S2P59780 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
AP3S2P59780 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
AP3S2P59780 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
AP3S2P59780 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
AP3S2P59780 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
AP3S2P59780 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
AP3S2P59780 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.76■□□□□ 0.91
AP3S2P59780 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
AP3S2P59780 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC20.75■□□□□ 0.91
AP3S2P59780 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
AP3S2P59780 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC20.75■□□□□ 0.91
AP3S2P59780 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.75■□□□□ 0.91
AP3S2P59780 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
AP3S2P59780 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
AP3S2P59780 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
AP3S2P59780 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
AP3S2P59780 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
AP3S2P59780 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC20.74■□□□□ 0.91
AP3S2P59780 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
AP3S2P59780 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.74■□□□□ 0.91
AP3S2P59780 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
AP3S2P59780 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
AP3S2P59780 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
AP3S2P59780 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.73■□□□□ 0.91
AP3S2P59780 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC20.73■□□□□ 0.91
AP3S2P59780 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC20.73■□□□□ 0.91
AP3S2P59780 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
AP3S2P59780 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
AP3S2P59780 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
AP3S2P59780 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
AP3S2P59780 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC20.72■□□□□ 0.91
AP3S2P59780 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
AP3S2P59780 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
AP3S2P59780 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.72■□□□□ 0.91
AP3S2P59780 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
AP3S2P59780 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
AP3S2P59780 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
AP3S2P59780 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
AP3S2P59780 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
AP3S2P59780 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
AP3S2P59780 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
AP3S2P59780 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
AP3S2P59780 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
AP3S2P59780 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
AP3S2P59780 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
AP3S2P59780 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.71■□□□□ 0.91
AP3S2P59780 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
AP3S2P59780 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
AP3S2P59780 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
AP3S2P59780 EBPL-202ENST00000378268 680 ntTSL 3 BASIC20.7■□□□□ 0.9
AP3S2P59780 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
AP3S2P59780 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
AP3S2P59780 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
AP3S2P59780 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.7■□□□□ 0.9
AP3S2P59780 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.7■□□□□ 0.9
AP3S2P59780 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms