Protein–RNA interactions for Protein: P42830

CXCL5, C-X-C motif chemokine 5, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5P42830 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CXCL5P42830 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CXCL5P42830 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CXCL5P42830 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CXCL5P42830 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC16.28■□□□□ 0.2
CXCL5P42830 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CXCL5P42830 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CXCL5P42830 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
CXCL5P42830 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CXCL5P42830 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
CXCL5P42830 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
CXCL5P42830 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CXCL5P42830 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC16.27■□□□□ 0.2
CXCL5P42830 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CXCL5P42830 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC16.26■□□□□ 0.19
CXCL5P42830 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CXCL5P42830 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC16.26■□□□□ 0.19
CXCL5P42830 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
CXCL5P42830 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CXCL5P42830 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
CXCL5P42830 AC010501.1-201ENST00000606270 1962 ntBASIC16.26■□□□□ 0.19
CXCL5P42830 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CXCL5P42830 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CXCL5P42830 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CXCL5P42830 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC16.25■□□□□ 0.19
CXCL5P42830 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
CXCL5P42830 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CXCL5P42830 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CXCL5P42830 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CXCL5P42830 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC16.24■□□□□ 0.19
CXCL5P42830 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CXCL5P42830 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CXCL5P42830 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC16.24■□□□□ 0.19
CXCL5P42830 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CXCL5P42830 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CXCL5P42830 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CXCL5P42830 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CXCL5P42830 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CXCL5P42830 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CXCL5P42830 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC16.24■□□□□ 0.19
CXCL5P42830 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC16.23■□□□□ 0.19
CXCL5P42830 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CXCL5P42830 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CXCL5P42830 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CXCL5P42830 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CXCL5P42830 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CXCL5P42830 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CXCL5P42830 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
CXCL5P42830 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CXCL5P42830 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CXCL5P42830 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC16.22■□□□□ 0.19
CXCL5P42830 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CXCL5P42830 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC16.22■□□□□ 0.19
CXCL5P42830 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CXCL5P42830 RPS2-210ENST00000530225 765 ntTSL 2 BASIC16.22■□□□□ 0.19
CXCL5P42830 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CXCL5P42830 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CXCL5P42830 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CXCL5P42830 AC044849.2-201ENST00000606596 710 ntBASIC16.21■□□□□ 0.19
CXCL5P42830 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC16.21■□□□□ 0.18
CXCL5P42830 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC16.2■□□□□ 0.18
CXCL5P42830 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CXCL5P42830 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CXCL5P42830 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CXCL5P42830 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CXCL5P42830 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CXCL5P42830 AC142381.3-201ENST00000568208 1670 ntBASIC16.19■□□□□ 0.18
CXCL5P42830 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CXCL5P42830 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
CXCL5P42830 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC16.19■□□□□ 0.18
CXCL5P42830 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CXCL5P42830 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CXCL5P42830 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CXCL5P42830 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CXCL5P42830 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC16.18■□□□□ 0.18
CXCL5P42830 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CXCL5P42830 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CXCL5P42830 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CXCL5P42830 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC16.18■□□□□ 0.18
CXCL5P42830 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CXCL5P42830 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CXCL5P42830 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CXCL5P42830 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CXCL5P42830 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CXCL5P42830 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CXCL5P42830 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CXCL5P42830 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CXCL5P42830 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
CXCL5P42830 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CXCL5P42830 CEBPA-AS1-201ENST00000592982 2198 ntBASIC16.16■□□□□ 0.18
CXCL5P42830 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CXCL5P42830 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CXCL5P42830 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CXCL5P42830 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CXCL5P42830 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CXCL5P42830 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC16.15■□□□□ 0.18
CXCL5P42830 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CXCL5P42830 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC16.15■□□□□ 0.18
CXCL5P42830 AC087741.3-201ENST00000624270 1347 ntBASIC16.15■□□□□ 0.18
CXCL5P42830 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms