Protein–RNA interactions for Protein: P28329

CHAT, Choline O-acetyltransferase, humanhuman

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHATP28329 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHATP28329 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
CHATP28329 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CHATP28329 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CHATP28329 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC20.6■□□□□ 0.89
CHATP28329 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CHATP28329 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHATP28329 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
CHATP28329 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
CHATP28329 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC20.59■□□□□ 0.89
CHATP28329 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CHATP28329 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHATP28329 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.59■□□□□ 0.89
CHATP28329 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHATP28329 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.59■□□□□ 0.89
CHATP28329 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.59■□□□□ 0.89
CHATP28329 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
CHATP28329 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.58■□□□□ 0.89
CHATP28329 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
CHATP28329 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.58■□□□□ 0.89
CHATP28329 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CHATP28329 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
CHATP28329 DUX4L13-201ENST00000554103 1267 ntBASIC20.58■□□□□ 0.89
CHATP28329 DUX4L15-201ENST00000611059 1267 ntBASIC20.58■□□□□ 0.89
CHATP28329 DUX4L23-201ENST00000615195 1269 ntBASIC20.58■□□□□ 0.89
CHATP28329 DUX4L24-201ENST00000617576 1269 ntBASIC20.58■□□□□ 0.89
CHATP28329 DUX4L22-201ENST00000618238 1269 ntBASIC20.58■□□□□ 0.89
CHATP28329 DUX4L20-201ENST00000619712 1269 ntBASIC20.58■□□□□ 0.89
CHATP28329 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC20.58■□□□□ 0.89
CHATP28329 DUX4L21-201ENST00000622058 1269 ntBASIC20.58■□□□□ 0.89
CHATP28329 DUX4L10-201ENST00000622460 1267 ntBASIC20.58■□□□□ 0.89
CHATP28329 DUX4L25-201ENST00000624915 1269 ntBASIC20.58■□□□□ 0.89
CHATP28329 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CHATP28329 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
CHATP28329 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
CHATP28329 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
CHATP28329 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.57■□□□□ 0.88
CHATP28329 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC20.57■□□□□ 0.88
CHATP28329 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CHATP28329 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHATP28329 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHATP28329 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC20.56■□□□□ 0.88
CHATP28329 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC20.56■□□□□ 0.88
CHATP28329 AC008813.1-201ENST00000536597 885 ntBASIC20.56■□□□□ 0.88
CHATP28329 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHATP28329 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHATP28329 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHATP28329 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHATP28329 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
CHATP28329 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
CHATP28329 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHATP28329 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CHATP28329 CHST11-202ENST00000546689 756 ntTSL 2 BASIC20.55■□□□□ 0.88
CHATP28329 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHATP28329 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHATP28329 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
CHATP28329 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CHATP28329 MIR219A2-201ENST00000608502 1504 ntBASIC20.54■□□□□ 0.88
CHATP28329 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CHATP28329 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC20.54■□□□□ 0.88
CHATP28329 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC20.54■□□□□ 0.88
CHATP28329 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CHATP28329 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHATP28329 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHATP28329 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHATP28329 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHATP28329 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC20.53■□□□□ 0.88
CHATP28329 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC20.53■□□□□ 0.88
CHATP28329 AC148477.6-201ENST00000623746 465 ntBASIC20.53■□□□□ 0.88
CHATP28329 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.53■□□□□ 0.88
CHATP28329 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CHATP28329 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHATP28329 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHATP28329 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CHATP28329 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHATP28329 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
CHATP28329 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
CHATP28329 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC20.51■□□□□ 0.87
CHATP28329 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
CHATP28329 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHATP28329 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CHATP28329 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHATP28329 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.51■□□□□ 0.87
CHATP28329 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHATP28329 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.5■□□□□ 0.87
CHATP28329 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.5■□□□□ 0.87
CHATP28329 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHATP28329 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CHATP28329 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC20.5■□□□□ 0.87
CHATP28329 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
CHATP28329 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHATP28329 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CHATP28329 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
CHATP28329 DUX4L11-201ENST00000611504 1267 ntBASIC20.49■□□□□ 0.87
CHATP28329 DUX4L12-201ENST00000614593 1267 ntBASIC20.49■□□□□ 0.87
CHATP28329 DUX4L14-201ENST00000621227 1267 ntBASIC20.49■□□□□ 0.87
CHATP28329 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CHATP28329 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
CHATP28329 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC20.48■□□□□ 0.87
CHATP28329 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms