Protein–RNA interactions for Protein: P25846

MSH1, DNA mismatch repair protein MSH1, mitochondrial, yeastyeast

Predictions only

Length 959 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH1P25846 SPG5YMR191W 1122 nt7.03□□□□□ -1.28
MSH1P25846 AAD14YNL331C 1131 nt7.03□□□□□ -1.28
MSH1P25846 ATG23YLR431C 1362 nt7.03□□□□□ -1.28
MSH1P25846 UME1YPL139C 1383 nt7.03□□□□□ -1.28
MSH1P25846 YIP4YGL198W 708 nt7.02□□□□□ -1.29
MSH1P25846 MOD5YOR274W 1287 nt7.02□□□□□ -1.29
MSH1P25846 HST2YPL015C 1074 nt7.02□□□□□ -1.29
MSH1P25846 MRC1YCL061C 3291 nt7.02□□□□□ -1.29
MSH1P25846 ENP1YBR247C 1452 nt7.02□□□□□ -1.29
MSH1P25846 GPA1YHR005C 1419 nt7.01□□□□□ -1.29
MSH1P25846 EDE1YBL047C 4146 nt7.01□□□□□ -1.29
MSH1P25846 RPP1YHR062C 882 nt7.01□□□□□ -1.29
MSH1P25846 SQT1YIR012W 1296 nt7.01□□□□□ -1.29
MSH1P25846 YHR020WYHR020W 2067 nt7□□□□□ -1.29
MSH1P25846 SLD7YOR060C 774 nt7□□□□□ -1.29
MSH1P25846 BRN1YBL097W 2265 nt7□□□□□ -1.29
MSH1P25846 RSA4YCR072C 1548 nt7□□□□□ -1.29
MSH1P25846 CYC8YBR112C 2901 nt7□□□□□ -1.29
MSH1P25846 MSY1YPL097W 1479 nt6.99□□□□□ -1.29
MSH1P25846 COX9YDL067C 180 nt6.99□□□□□ -1.29
MSH1P25846 YLR123CYLR123C 330 nt6.99□□□□□ -1.29
MSH1P25846 YLR312CYLR312C 1197 nt6.99□□□□□ -1.29
MSH1P25846 PLB2YMR006C 2121 nt6.99□□□□□ -1.29
MSH1P25846 MCP1YOR228C 909 nt6.99□□□□□ -1.29
MSH1P25846 YBR113WYBR113W 483 nt6.99□□□□□ -1.29
MSH1P25846 PFK2YMR205C 2880 nt6.98□□□□□ -1.29
MSH1P25846 NFS1YCL017C 1494 nt6.98□□□□□ -1.29
MSH1P25846 CHS5YLR330W 2016 nt6.98□□□□□ -1.29
MSH1P25846 SPS22YCL048W 1392 nt6.98□□□□□ -1.29
MSH1P25846 VPS61YDR136C 573 nt6.98□□□□□ -1.29
MSH1P25846 HGH1YGR187C 1185 nt6.98□□□□□ -1.29
MSH1P25846 ICT1YLR099C 1185 nt6.98□□□□□ -1.29
MSH1P25846 MBF1YOR298C-A 456 nt6.98□□□□□ -1.29
MSH1P25846 MPE1YKL059C 1326 nt6.98□□□□□ -1.29
MSH1P25846 TFC6YDR362C 2019 nt6.98□□□□□ -1.29
MSH1P25846 CYS3YAL012W 1185 nt6.97□□□□□ -1.29
MSH1P25846 AVO2YMR068W 1281 nt6.97□□□□□ -1.29
MSH1P25846 YMR034CYMR034C 1305 nt6.97□□□□□ -1.29
MSH1P25846 ESC8YOL017W 2145 nt6.97□□□□□ -1.29
MSH1P25846 POP1YNL221C 2628 nt6.97□□□□□ -1.29
MSH1P25846 RMD9YGL107C 1941 nt6.96□□□□□ -1.3
MSH1P25846 PTC7YHR076W 1032 nt6.96□□□□□ -1.3
MSH1P25846 REV7YIL139C 738 nt6.96□□□□□ -1.3
MSH1P25846 LGE1YPL055C 999 nt6.96□□□□□ -1.3
MSH1P25846 PPM2YOL141W 2088 nt6.96□□□□□ -1.3
MSH1P25846 MRPS28YDR337W 861 nt6.95□□□□□ -1.3
MSH1P25846 ATG36YJL185C 882 nt6.95□□□□□ -1.3
MSH1P25846 YNL120CYNL120C 486 nt6.95□□□□□ -1.3
MSH1P25846 NTG2YOL043C 1143 nt6.95□□□□□ -1.3
MSH1P25846 YDR514CYDR514C 1452 nt6.95□□□□□ -1.3
MSH1P25846 YPR130CYPR130C 408 nt6.94□□□□□ -1.3
MSH1P25846 FET4YMR319C 1659 nt6.93□□□□□ -1.3
MSH1P25846 AFG1YEL052W 1530 nt6.93□□□□□ -1.3
MSH1P25846 EFM3YJR129C 1020 nt6.93□□□□□ -1.3
MSH1P25846 MIA40YKL195W 1212 nt6.93□□□□□ -1.3
MSH1P25846 GET4YOR164C 939 nt6.93□□□□□ -1.3
MSH1P25846 DFR1YOR236W 636 nt6.93□□□□□ -1.3
MSH1P25846 SPE3YPR069C 882 nt6.93□□□□□ -1.3
MSH1P25846 PYK2YOR347C 1521 nt6.92□□□□□ -1.3
MSH1P25846 OAC1YKL120W 975 nt6.92□□□□□ -1.3
MSH1P25846 SEC62YPL094C 825 nt6.92□□□□□ -1.3
MSH1P25846 YLL058WYLL058W 1728 nt6.92□□□□□ -1.3
MSH1P25846 CMR1YDL156W 1569 nt6.91□□□□□ -1.3
MSH1P25846 HED1YDR014W-A 489 nt6.91□□□□□ -1.3
MSH1P25846 COA1YIL157C 594 nt6.91□□□□□ -1.3
MSH1P25846 YIR017W-AYIR017W-A 600 nt6.91□□□□□ -1.3
MSH1P25846 YLR162WYLR162W 357 nt6.91□□□□□ -1.3
MSH1P25846 snR30snR30 606 nt6.91□□□□□ -1.3
MSH1P25846 MTC5YDR128W 3447 nt6.91□□□□□ -1.3
MSH1P25846 KTR5YNL029C 1569 nt6.91□□□□□ -1.3
MSH1P25846 OPT1YJL212C 2400 nt6.9□□□□□ -1.3
MSH1P25846 PRY3YJL078C 2646 nt6.9□□□□□ -1.3
MSH1P25846 YIR042CYIR042C 711 nt6.9□□□□□ -1.3
MSH1P25846 SML1YML058W 315 nt6.9□□□□□ -1.3
MSH1P25846 ZIM17YNL310C 525 nt6.9□□□□□ -1.3
MSH1P25846 SMX3YPR182W 261 nt6.9□□□□□ -1.3
MSH1P25846 PGM1YKL127W 1713 nt6.9□□□□□ -1.31
MSH1P25846 VHT1YGR065C 1782 nt6.9□□□□□ -1.31
MSH1P25846 YGR127WYGR127W 939 nt6.89□□□□□ -1.31
MSH1P25846 BSC4YNL269W 396 nt6.89□□□□□ -1.31
MSH1P25846 MRPS12YNR036C 462 nt6.89□□□□□ -1.31
MSH1P25846 YPL250W-AYPL250W-A 288 nt6.89□□□□□ -1.31
MSH1P25846 YFL052WYFL052W 1398 nt6.89□□□□□ -1.31
MSH1P25846 PLB3YOL011W 2061 nt6.89□□□□□ -1.31
MSH1P25846 SSK22YCR073C 3996 nt6.88□□□□□ -1.31
MSH1P25846 QCR6YFR033C 444 nt6.88□□□□□ -1.31
MSH1P25846 FZF1YGL254W 900 nt6.88□□□□□ -1.31
MSH1P25846 REG2YBR050C 1017 nt6.88□□□□□ -1.31
MSH1P25846 YDR387CYDR387C 1668 nt6.87□□□□□ -1.31
MSH1P25846 PUS4YNL292W 1212 nt6.87□□□□□ -1.31
MSH1P25846 YNR005CYNR005C 405 nt6.87□□□□□ -1.31
MSH1P25846 ERG10YPL028W 1197 nt6.87□□□□□ -1.31
MSH1P25846 YHL017WYHL017W 1599 nt6.86□□□□□ -1.31
MSH1P25846 AIM3YBR108W 2844 nt6.86□□□□□ -1.31
MSH1P25846 COQ1YBR003W 1422 nt6.86□□□□□ -1.31
MSH1P25846 CIA1YDR267C 993 nt6.86□□□□□ -1.31
MSH1P25846 YGL102CYGL102C 429 nt6.86□□□□□ -1.31
MSH1P25846 ERP2YAL007C 648 nt6.86□□□□□ -1.31
MSH1P25846 KSH1YNL024C-A 219 nt6.86□□□□□ -1.31
MSH1P25846 PRP24YMR268C 1335 nt6.85□□□□□ -1.31
Retrieved 100 of 7,029 protein–RNA pairs in 11.6 ms