Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
CHMP24386 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC22.67■■□□□ 1.22
CHMP24386 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CHMP24386 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CHMP24386 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
CHMP24386 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CHMP24386 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CHMP24386 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
CHMP24386 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC22.66■■□□□ 1.22
CHMP24386 AP004609.3-201ENST00000610705 1884 ntBASIC22.65■■□□□ 1.22
CHMP24386 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
CHMP24386 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
CHMP24386 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
CHMP24386 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CHMP24386 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC22.65■■□□□ 1.22
CHMP24386 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
CHMP24386 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.22
CHMP24386 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC22.64■■□□□ 1.21
CHMP24386 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
CHMP24386 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CHMP24386 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CHMP24386 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC22.63■■□□□ 1.21
CHMP24386 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CHMP24386 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
CHMP24386 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC22.63■■□□□ 1.21
CHMP24386 GPX1-201ENST00000419349 1106 ntBASIC22.63■■□□□ 1.21
CHMP24386 CEP120-209ENST00000515110 606 ntTSL 3 BASIC22.63■■□□□ 1.21
CHMP24386 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CHMP24386 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CHMP24386 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC22.62■■□□□ 1.21
CHMP24386 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC22.62■■□□□ 1.21
CHMP24386 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CHMP24386 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CHMP24386 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC22.62■■□□□ 1.21
CHMP24386 AC126177.7-201ENST00000547904 679 ntBASIC22.62■■□□□ 1.21
CHMP24386 AC022413.1-201ENST00000624602 984 ntBASIC22.62■■□□□ 1.21
CHMP24386 BRD4-212ENST00000630599 726 ntTSL 2 BASIC22.62■■□□□ 1.21
CHMP24386 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CHMP24386 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CHMP24386 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CHMP24386 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC22.61■■□□□ 1.21
CHMP24386 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC22.61■■□□□ 1.21
CHMP24386 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC22.61■■□□□ 1.21
CHMP24386 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CHMP24386 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CHMP24386 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CHMP24386 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC22.6■■□□□ 1.21
CHMP24386 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CHMP24386 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
CHMP24386 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
CHMP24386 HES4-202ENST00000428771 1040 ntTSL 2 BASIC22.59■■□□□ 1.21
CHMP24386 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC22.59■■□□□ 1.21
CHMP24386 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CHMP24386 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC22.59■■□□□ 1.21
CHMP24386 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CHMP24386 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.2
CHMP24386 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.2
CHMP24386 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
CHMP24386 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC22.58■■□□□ 1.2
CHMP24386 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC22.57■■□□□ 1.2
CHMP24386 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC22.57■■□□□ 1.2
CHMP24386 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC22.57■■□□□ 1.2
CHMP24386 AC060814.1-201ENST00000554326 538 ntBASIC22.57■■□□□ 1.2
CHMP24386 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC22.57■■□□□ 1.2
CHMP24386 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
CHMP24386 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
CHMP24386 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CHMP24386 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CHMP24386 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
CHMP24386 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC22.56■■□□□ 1.2
CHMP24386 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
CHMP24386 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CHMP24386 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC22.55■■□□□ 1.2
CHMP24386 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CHMP24386 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CHMP24386 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
CHMP24386 RNF126P1-201ENST00000567452 1320 ntBASIC22.55■■□□□ 1.2
CHMP24386 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CHMP24386 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CHMP24386 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC22.54■■□□□ 1.2
CHMP24386 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
CHMP24386 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC22.54■■□□□ 1.2
CHMP24386 MED25-210ENST00000612854 801 ntTSL 5 BASIC22.53■■□□□ 1.2
CHMP24386 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CHMP24386 MED25-214ENST00000622402 642 ntTSL 5 BASIC22.53■■□□□ 1.2
CHMP24386 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC22.53■■□□□ 1.2
CHMP24386 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC22.53■■□□□ 1.2
CHMP24386 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CHMP24386 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CHMP24386 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
CHMP24386 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CHMP24386 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CHMP24386 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CHMP24386 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
CHMP24386 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CHMP24386 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CHMP24386 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC22.51■■□□□ 1.19
CHMP24386 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CHMP24386 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC22.51■■□□□ 1.19
CHMP24386 RARRES2P2-201ENST00000394842 485 ntBASIC22.51■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms