Protein–RNA interactions for Protein: P04435

TCRB, T-cell receptor beta chain V region CTL-L17, humanhuman

Predictions only

Length 133 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBP04435 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TCRBP04435 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TCRBP04435 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
TCRBP04435 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
TCRBP04435 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TCRBP04435 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
TCRBP04435 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
TCRBP04435 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TCRBP04435 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.69■□□□□ 0.9
TCRBP04435 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.69■□□□□ 0.9
TCRBP04435 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TCRBP04435 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TCRBP04435 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TCRBP04435 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TCRBP04435 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.68■□□□□ 0.9
TCRBP04435 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TCRBP04435 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TCRBP04435 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.68■□□□□ 0.9
TCRBP04435 WHAMMP3-201ENST00000611636 1609 ntBASIC20.67■□□□□ 0.9
TCRBP04435 CLDN5-201ENST00000403084 2357 ntBASIC20.67■□□□□ 0.9
TCRBP04435 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.67■□□□□ 0.9
TCRBP04435 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
TCRBP04435 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TCRBP04435 KLF16-203ENST00000592313 508 ntTSL 3 BASIC20.67■□□□□ 0.9
TCRBP04435 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.67■□□□□ 0.9
TCRBP04435 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TCRBP04435 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TCRBP04435 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TCRBP04435 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TCRBP04435 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC20.66■□□□□ 0.9
TCRBP04435 AC135983.2-203ENST00000454486 1613 ntBASIC20.66■□□□□ 0.9
TCRBP04435 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TCRBP04435 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TCRBP04435 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TCRBP04435 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TCRBP04435 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TCRBP04435 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC20.65■□□□□ 0.9
TCRBP04435 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
TCRBP04435 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TCRBP04435 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TCRBP04435 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC20.64■□□□□ 0.89
TCRBP04435 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC20.64■□□□□ 0.89
TCRBP04435 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TCRBP04435 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.64■□□□□ 0.89
TCRBP04435 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TCRBP04435 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TCRBP04435 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
TCRBP04435 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC20.63■□□□□ 0.89
TCRBP04435 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
TCRBP04435 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TCRBP04435 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.63■□□□□ 0.89
TCRBP04435 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
TCRBP04435 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TCRBP04435 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TCRBP04435 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TCRBP04435 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TCRBP04435 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.62■□□□□ 0.89
TCRBP04435 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC20.62■□□□□ 0.89
TCRBP04435 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
TCRBP04435 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TCRBP04435 LINC01124-201ENST00000409786 2117 ntBASIC20.62■□□□□ 0.89
TCRBP04435 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.62■□□□□ 0.89
TCRBP04435 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TCRBP04435 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TCRBP04435 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
TCRBP04435 AC097639.1-201ENST00000565519 1891 ntBASIC20.61■□□□□ 0.89
TCRBP04435 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TCRBP04435 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TCRBP04435 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
TCRBP04435 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TCRBP04435 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
TCRBP04435 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TCRBP04435 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC20.6■□□□□ 0.89
TCRBP04435 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC20.6■□□□□ 0.89
TCRBP04435 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC20.6■□□□□ 0.89
TCRBP04435 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TCRBP04435 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TCRBP04435 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TCRBP04435 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TCRBP04435 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TCRBP04435 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TCRBP04435 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
TCRBP04435 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TCRBP04435 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
TCRBP04435 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TCRBP04435 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC20.59■□□□□ 0.89
TCRBP04435 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
TCRBP04435 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TCRBP04435 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TCRBP04435 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TCRBP04435 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TCRBP04435 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC20.58■□□□□ 0.89
TCRBP04435 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TCRBP04435 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TCRBP04435 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TCRBP04435 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TCRBP04435 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC20.57■□□□□ 0.88
TCRBP04435 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TCRBP04435 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.57■□□□□ 0.88
TCRBP04435 WHAMMP2-203ENST00000563942 1603 ntBASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 12 ms