Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.49■□□□□ 0.87
CD74P04233 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CD74P04233 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
CD74P04233 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.48■□□□□ 0.87
CD74P04233 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.48■□□□□ 0.87
CD74P04233 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC20.48■□□□□ 0.87
CD74P04233 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC20.48■□□□□ 0.87
CD74P04233 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CD74P04233 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CD74P04233 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
CD74P04233 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CD74P04233 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC20.47■□□□□ 0.87
CD74P04233 CALM3-209ENST00000597743 577 ntTSL 4 BASIC20.47■□□□□ 0.87
CD74P04233 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CD74P04233 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CD74P04233 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.46■□□□□ 0.87
CD74P04233 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CD74P04233 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CD74P04233 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CD74P04233 AC097358.2-201ENST00000607541 1159 ntBASIC20.46■□□□□ 0.87
CD74P04233 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.46■□□□□ 0.87
CD74P04233 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.45■□□□□ 0.87
CD74P04233 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
CD74P04233 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
CD74P04233 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CD74P04233 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
CD74P04233 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CD74P04233 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CD74P04233 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CD74P04233 AC110285.7-201ENST00000624417 1536 ntBASIC20.45■□□□□ 0.86
CD74P04233 AC005559.1-201ENST00000589661 871 ntBASIC20.45■□□□□ 0.86
CD74P04233 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CD74P04233 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC20.45■□□□□ 0.86
CD74P04233 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CD74P04233 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CD74P04233 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CD74P04233 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CD74P04233 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CD74P04233 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CD74P04233 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CD74P04233 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
CD74P04233 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CD74P04233 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CD74P04233 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CD74P04233 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CD74P04233 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CD74P04233 AC012676.1-201ENST00000574705 1949 ntBASIC20.41■□□□□ 0.86
CD74P04233 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CD74P04233 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC20.41■□□□□ 0.86
CD74P04233 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC20.41■□□□□ 0.86
CD74P04233 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
CD74P04233 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CD74P04233 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CD74P04233 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CD74P04233 AC096887.2-201ENST00000623443 1957 ntBASIC20.4■□□□□ 0.86
CD74P04233 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.39■□□□□ 0.86
CD74P04233 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CD74P04233 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC20.39■□□□□ 0.85
CD74P04233 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.39■□□□□ 0.85
CD74P04233 AC133561.1-201ENST00000568600 2415 ntBASIC20.39■□□□□ 0.85
CD74P04233 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CD74P04233 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC20.39■□□□□ 0.85
CD74P04233 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CD74P04233 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CD74P04233 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CD74P04233 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CD74P04233 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CD74P04233 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CD74P04233 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CD74P04233 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CD74P04233 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC20.37■□□□□ 0.85
CD74P04233 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CD74P04233 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CD74P04233 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CD74P04233 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC20.37■□□□□ 0.85
CD74P04233 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CD74P04233 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.37■□□□□ 0.85
CD74P04233 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.36■□□□□ 0.85
CD74P04233 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CD74P04233 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
CD74P04233 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CD74P04233 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.36■□□□□ 0.85
CD74P04233 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CD74P04233 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CD74P04233 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CD74P04233 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
CD74P04233 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.35■□□□□ 0.85
CD74P04233 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CD74P04233 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CD74P04233 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.35■□□□□ 0.85
CD74P04233 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CD74P04233 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CD74P04233 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
CD74P04233 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.34■□□□□ 0.85
CD74P04233 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CD74P04233 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CD74P04233 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.34■□□□□ 0.85
CD74P04233 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CD74P04233 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CD74P04233 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms