Protein–RNA interactions for Protein: O95685

PPP1R3D, Protein phosphatase 1 regulatory subunit 3D, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3DO95685 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
PPP1R3DO95685 HLA-V-202ENST00000446817 847 ntBASIC21.94■■□□□ 1.1
PPP1R3DO95685 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PPP1R3DO95685 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
PPP1R3DO95685 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PPP1R3DO95685 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PPP1R3DO95685 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21.93■■□□□ 1.1
PPP1R3DO95685 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PPP1R3DO95685 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PPP1R3DO95685 ZNRF2P2-203ENST00000454624 420 ntBASIC21.93■■□□□ 1.1
PPP1R3DO95685 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC21.93■■□□□ 1.1
PPP1R3DO95685 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PPP1R3DO95685 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PPP1R3DO95685 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PPP1R3DO95685 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
PPP1R3DO95685 CHST11-203ENST00000547956 936 ntTSL 2 BASIC21.92■■□□□ 1.1
PPP1R3DO95685 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.91■■□□□ 1.1
PPP1R3DO95685 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PPP1R3DO95685 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PPP1R3DO95685 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
PPP1R3DO95685 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PPP1R3DO95685 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PPP1R3DO95685 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PPP1R3DO95685 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PPP1R3DO95685 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC21.9■■□□□ 1.1
PPP1R3DO95685 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PPP1R3DO95685 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
PPP1R3DO95685 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PPP1R3DO95685 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC21.9■■□□□ 1.1
PPP1R3DO95685 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
PPP1R3DO95685 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
PPP1R3DO95685 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
PPP1R3DO95685 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
PPP1R3DO95685 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
PPP1R3DO95685 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
PPP1R3DO95685 RNF166-209ENST00000567844 633 ntTSL 5 BASIC21.89■■□□□ 1.09
PPP1R3DO95685 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC21.89■■□□□ 1.09
PPP1R3DO95685 AL359258.2-201ENST00000564063 1566 ntBASIC21.89■■□□□ 1.09
PPP1R3DO95685 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PPP1R3DO95685 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PPP1R3DO95685 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
PPP1R3DO95685 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PPP1R3DO95685 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
PPP1R3DO95685 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PPP1R3DO95685 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PPP1R3DO95685 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
PPP1R3DO95685 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC21.87■■□□□ 1.09
PPP1R3DO95685 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC21.87■■□□□ 1.09
PPP1R3DO95685 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC21.87■■□□□ 1.09
PPP1R3DO95685 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.87■■□□□ 1.09
PPP1R3DO95685 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC21.87■■□□□ 1.09
PPP1R3DO95685 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PPP1R3DO95685 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC21.87■■□□□ 1.09
PPP1R3DO95685 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
PPP1R3DO95685 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
PPP1R3DO95685 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PPP1R3DO95685 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PPP1R3DO95685 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
PPP1R3DO95685 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
PPP1R3DO95685 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PPP1R3DO95685 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC21.85■■□□□ 1.09
PPP1R3DO95685 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PPP1R3DO95685 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
PPP1R3DO95685 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
PPP1R3DO95685 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC21.84■■□□□ 1.09
PPP1R3DO95685 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
PPP1R3DO95685 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PPP1R3DO95685 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PPP1R3DO95685 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC21.84■■□□□ 1.09
PPP1R3DO95685 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC21.84■■□□□ 1.09
PPP1R3DO95685 AL359504.2-201ENST00000605506 1601 ntBASIC21.84■■□□□ 1.09
PPP1R3DO95685 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PPP1R3DO95685 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PPP1R3DO95685 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PPP1R3DO95685 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PPP1R3DO95685 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PPP1R3DO95685 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PPP1R3DO95685 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PPP1R3DO95685 AGPS-202ENST00000409888 815 ntTSL 4 BASIC21.83■■□□□ 1.09
PPP1R3DO95685 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PPP1R3DO95685 CR559946.2-201ENST00000623684 991 ntBASIC21.83■■□□□ 1.09
PPP1R3DO95685 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PPP1R3DO95685 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
PPP1R3DO95685 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
PPP1R3DO95685 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.82■■□□□ 1.08
PPP1R3DO95685 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.82■■□□□ 1.08
PPP1R3DO95685 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.82■■□□□ 1.08
PPP1R3DO95685 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PPP1R3DO95685 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
PPP1R3DO95685 MED25-210ENST00000612854 801 ntTSL 5 BASIC21.81■■□□□ 1.08
PPP1R3DO95685 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PPP1R3DO95685 MED25-214ENST00000622402 642 ntTSL 5 BASIC21.81■■□□□ 1.08
PPP1R3DO95685 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PPP1R3DO95685 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PPP1R3DO95685 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PPP1R3DO95685 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PPP1R3DO95685 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.8■■□□□ 1.08
PPP1R3DO95685 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
PPP1R3DO95685 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
PPP1R3DO95685 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms