Protein–RNA interactions for Protein: O95238

SPDEF, SAM pointed domain-containing Ets transcription factor, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDEFO95238 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SPDEFO95238 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
SPDEFO95238 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SPDEFO95238 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
SPDEFO95238 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC20.45■□□□□ 0.86
SPDEFO95238 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SPDEFO95238 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SPDEFO95238 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SPDEFO95238 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SPDEFO95238 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC20.44■□□□□ 0.86
SPDEFO95238 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SPDEFO95238 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC20.44■□□□□ 0.86
SPDEFO95238 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.44■□□□□ 0.86
SPDEFO95238 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC20.44■□□□□ 0.86
SPDEFO95238 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
SPDEFO95238 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SPDEFO95238 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
SPDEFO95238 WHAMMP2-203ENST00000563942 1603 ntBASIC20.43■□□□□ 0.86
SPDEFO95238 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SPDEFO95238 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SPDEFO95238 AC100797.4-201ENST00000631653 1827 ntBASIC20.43■□□□□ 0.86
SPDEFO95238 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.43■□□□□ 0.86
SPDEFO95238 AC012676.1-201ENST00000574705 1949 ntBASIC20.43■□□□□ 0.86
SPDEFO95238 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SPDEFO95238 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SPDEFO95238 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SPDEFO95238 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC20.42■□□□□ 0.86
SPDEFO95238 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC20.42■□□□□ 0.86
SPDEFO95238 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
SPDEFO95238 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SPDEFO95238 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SPDEFO95238 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC20.42■□□□□ 0.86
SPDEFO95238 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SPDEFO95238 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
SPDEFO95238 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.41■□□□□ 0.86
SPDEFO95238 DUX4L29-201ENST00000425409 679 ntBASIC20.41■□□□□ 0.86
SPDEFO95238 RPS2P35-201ENST00000443417 897 ntBASIC20.41■□□□□ 0.86
SPDEFO95238 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SPDEFO95238 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
SPDEFO95238 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
SPDEFO95238 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
SPDEFO95238 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SPDEFO95238 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SPDEFO95238 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SPDEFO95238 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SPDEFO95238 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
SPDEFO95238 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SPDEFO95238 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SPDEFO95238 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
SPDEFO95238 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SPDEFO95238 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
SPDEFO95238 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
SPDEFO95238 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SPDEFO95238 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
SPDEFO95238 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SPDEFO95238 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SPDEFO95238 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
SPDEFO95238 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SPDEFO95238 AP002414.2-202ENST00000590929 1450 ntBASIC20.38■□□□□ 0.85
SPDEFO95238 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SPDEFO95238 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
SPDEFO95238 AC021231.2-201ENST00000594613 730 ntBASIC20.38■□□□□ 0.85
SPDEFO95238 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SPDEFO95238 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
SPDEFO95238 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SPDEFO95238 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SPDEFO95238 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SPDEFO95238 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SPDEFO95238 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC20.36■□□□□ 0.85
SPDEFO95238 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.36■□□□□ 0.85
SPDEFO95238 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SPDEFO95238 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SPDEFO95238 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SPDEFO95238 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC20.36■□□□□ 0.85
SPDEFO95238 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
SPDEFO95238 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.35■□□□□ 0.85
SPDEFO95238 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.35■□□□□ 0.85
SPDEFO95238 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SPDEFO95238 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SPDEFO95238 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SPDEFO95238 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
SPDEFO95238 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SPDEFO95238 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SPDEFO95238 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
SPDEFO95238 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC20.34■□□□□ 0.85
SPDEFO95238 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.34■□□□□ 0.85
SPDEFO95238 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SPDEFO95238 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
SPDEFO95238 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SPDEFO95238 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SPDEFO95238 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC20.33■□□□□ 0.85
SPDEFO95238 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SPDEFO95238 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
SPDEFO95238 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SPDEFO95238 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SPDEFO95238 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SPDEFO95238 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
SPDEFO95238 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SPDEFO95238 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SPDEFO95238 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms