Protein–RNA interactions for Protein: O75954

TSPAN9, Tetraspanin-9, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9O75954 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC20.61■□□□□ 0.89
TSPAN9O75954 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.61■□□□□ 0.89
TSPAN9O75954 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TSPAN9O75954 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TSPAN9O75954 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC20.6■□□□□ 0.89
TSPAN9O75954 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TSPAN9O75954 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TSPAN9O75954 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC20.6■□□□□ 0.89
TSPAN9O75954 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
TSPAN9O75954 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TSPAN9O75954 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
TSPAN9O75954 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TSPAN9O75954 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TSPAN9O75954 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TSPAN9O75954 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TSPAN9O75954 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TSPAN9O75954 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TSPAN9O75954 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TSPAN9O75954 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC20.58■□□□□ 0.89
TSPAN9O75954 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TSPAN9O75954 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TSPAN9O75954 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TSPAN9O75954 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
TSPAN9O75954 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TSPAN9O75954 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TSPAN9O75954 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
TSPAN9O75954 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TSPAN9O75954 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC20.56■□□□□ 0.88
TSPAN9O75954 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TSPAN9O75954 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
TSPAN9O75954 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TSPAN9O75954 ABHD17AP3-201ENST00000503096 1137 ntBASIC20.56■□□□□ 0.88
TSPAN9O75954 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC20.56■□□□□ 0.88
TSPAN9O75954 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
TSPAN9O75954 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.56■□□□□ 0.88
TSPAN9O75954 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
TSPAN9O75954 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TSPAN9O75954 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.55■□□□□ 0.88
TSPAN9O75954 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC20.55■□□□□ 0.88
TSPAN9O75954 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TSPAN9O75954 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC20.55■□□□□ 0.88
TSPAN9O75954 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TSPAN9O75954 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
TSPAN9O75954 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
TSPAN9O75954 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
TSPAN9O75954 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TSPAN9O75954 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TSPAN9O75954 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
TSPAN9O75954 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
TSPAN9O75954 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TSPAN9O75954 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
TSPAN9O75954 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TSPAN9O75954 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TSPAN9O75954 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TSPAN9O75954 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TSPAN9O75954 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC20.53■□□□□ 0.88
TSPAN9O75954 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TSPAN9O75954 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TSPAN9O75954 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
TSPAN9O75954 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TSPAN9O75954 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
TSPAN9O75954 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TSPAN9O75954 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC20.52■□□□□ 0.88
TSPAN9O75954 CHST11-202ENST00000546689 756 ntTSL 2 BASIC20.52■□□□□ 0.88
TSPAN9O75954 BRD4-212ENST00000630599 726 ntTSL 2 BASIC20.52■□□□□ 0.88
TSPAN9O75954 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
TSPAN9O75954 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
TSPAN9O75954 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
TSPAN9O75954 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
TSPAN9O75954 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
TSPAN9O75954 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
TSPAN9O75954 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TSPAN9O75954 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TSPAN9O75954 AL139393.2-201ENST00000608721 2025 ntBASIC20.5■□□□□ 0.87
TSPAN9O75954 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TSPAN9O75954 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TSPAN9O75954 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TSPAN9O75954 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TSPAN9O75954 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TSPAN9O75954 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC20.5■□□□□ 0.87
TSPAN9O75954 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TSPAN9O75954 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TSPAN9O75954 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
TSPAN9O75954 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
TSPAN9O75954 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
TSPAN9O75954 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.5■□□□□ 0.87
TSPAN9O75954 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TSPAN9O75954 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
TSPAN9O75954 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC20.5■□□□□ 0.87
TSPAN9O75954 AL024507.2-201ENST00000606070 2574 ntBASIC20.49■□□□□ 0.87
TSPAN9O75954 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TSPAN9O75954 AC020928.2-201ENST00000588717 2197 ntBASIC20.49■□□□□ 0.87
TSPAN9O75954 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TSPAN9O75954 AP004833.2-201ENST00000532228 1454 ntBASIC20.49■□□□□ 0.87
TSPAN9O75954 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
TSPAN9O75954 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
TSPAN9O75954 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
TSPAN9O75954 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC20.48■□□□□ 0.87
TSPAN9O75954 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC20.48■□□□□ 0.87
TSPAN9O75954 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms