Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 RPS2-210ENST00000530225 765 ntTSL 2 BASIC24.45■■□□□ 1.5
RFPL1O75677 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC24.45■■□□□ 1.5
RFPL1O75677 ERN1-208ENST00000606895 2068 ntBASIC24.44■■□□□ 1.5
RFPL1O75677 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
RFPL1O75677 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC24.44■■□□□ 1.5
RFPL1O75677 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
RFPL1O75677 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
RFPL1O75677 SNAI3-AS1-204ENST00000567997 2048 ntBASIC24.43■■□□□ 1.5
RFPL1O75677 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
RFPL1O75677 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
RFPL1O75677 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
RFPL1O75677 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
RFPL1O75677 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
RFPL1O75677 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC24.42■■□□□ 1.5
RFPL1O75677 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
RFPL1O75677 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC24.42■■□□□ 1.5
RFPL1O75677 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
RFPL1O75677 AC093323.1-202ENST00000635031 2045 ntBASIC24.42■■□□□ 1.5
RFPL1O75677 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
RFPL1O75677 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
RFPL1O75677 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC24.41■■□□□ 1.5
RFPL1O75677 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
RFPL1O75677 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
RFPL1O75677 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC24.41■■□□□ 1.5
RFPL1O75677 CHML-204ENST00000638121 920 ntTSL 2 BASIC24.41■■□□□ 1.5
RFPL1O75677 AC010501.1-201ENST00000606270 1962 ntBASIC24.41■■□□□ 1.5
RFPL1O75677 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
RFPL1O75677 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC24.4■■□□□ 1.5
RFPL1O75677 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC24.4■■□□□ 1.5
RFPL1O75677 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
RFPL1O75677 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.5
RFPL1O75677 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
RFPL1O75677 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
RFPL1O75677 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
RFPL1O75677 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
RFPL1O75677 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
RFPL1O75677 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC24.38■■□□□ 1.49
RFPL1O75677 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC24.38■■□□□ 1.49
RFPL1O75677 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
RFPL1O75677 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
RFPL1O75677 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC24.38■■□□□ 1.49
RFPL1O75677 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
RFPL1O75677 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC24.38■■□□□ 1.49
RFPL1O75677 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
RFPL1O75677 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC24.37■■□□□ 1.49
RFPL1O75677 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
RFPL1O75677 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
RFPL1O75677 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC24.37■■□□□ 1.49
RFPL1O75677 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC24.37■■□□□ 1.49
RFPL1O75677 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
RFPL1O75677 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
RFPL1O75677 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
RFPL1O75677 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
RFPL1O75677 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
RFPL1O75677 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RFPL1O75677 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RFPL1O75677 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC24.35■■□□□ 1.49
RFPL1O75677 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RFPL1O75677 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC24.35■■□□□ 1.49
RFPL1O75677 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RFPL1O75677 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC24.35■■□□□ 1.49
RFPL1O75677 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
RFPL1O75677 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
RFPL1O75677 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
RFPL1O75677 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC24.34■■□□□ 1.49
RFPL1O75677 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
RFPL1O75677 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
RFPL1O75677 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
RFPL1O75677 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.49
RFPL1O75677 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.49
RFPL1O75677 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
RFPL1O75677 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
RFPL1O75677 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC24.32■■□□□ 1.48
RFPL1O75677 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
RFPL1O75677 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
RFPL1O75677 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
RFPL1O75677 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
RFPL1O75677 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC24.32■■□□□ 1.48
RFPL1O75677 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
RFPL1O75677 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
RFPL1O75677 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
RFPL1O75677 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
RFPL1O75677 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
RFPL1O75677 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
RFPL1O75677 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
RFPL1O75677 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
RFPL1O75677 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC24.31■■□□□ 1.48
RFPL1O75677 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
RFPL1O75677 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
RFPL1O75677 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC24.3■■□□□ 1.48
RFPL1O75677 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
RFPL1O75677 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
RFPL1O75677 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC24.3■■□□□ 1.48
RFPL1O75677 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
RFPL1O75677 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC24.29■■□□□ 1.48
RFPL1O75677 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
RFPL1O75677 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
RFPL1O75677 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC24.28■■□□□ 1.48
RFPL1O75677 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
RFPL1O75677 SRP68-213ENST00000629930 165 ntTSL 5 BASIC24.28■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms