Protein–RNA interactions for Protein: O75387

SLC43A1, Large neutral amino acids transporter small subunit 3, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC43A1O75387 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.97■■□□□ 1.11
SLC43A1O75387 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SLC43A1O75387 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
SLC43A1O75387 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC21.96■■□□□ 1.11
SLC43A1O75387 AL359258.2-201ENST00000564063 1566 ntBASIC21.96■■□□□ 1.11
SLC43A1O75387 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC21.96■■□□□ 1.11
SLC43A1O75387 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SLC43A1O75387 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SLC43A1O75387 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC21.96■■□□□ 1.11
SLC43A1O75387 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
SLC43A1O75387 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
SLC43A1O75387 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.95■■□□□ 1.1
SLC43A1O75387 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SLC43A1O75387 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC21.95■■□□□ 1.1
SLC43A1O75387 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SLC43A1O75387 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SLC43A1O75387 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SLC43A1O75387 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.94■■□□□ 1.1
SLC43A1O75387 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SLC43A1O75387 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
SLC43A1O75387 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.94■■□□□ 1.1
SLC43A1O75387 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
SLC43A1O75387 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
SLC43A1O75387 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SLC43A1O75387 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
SLC43A1O75387 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SLC43A1O75387 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SLC43A1O75387 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
SLC43A1O75387 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
SLC43A1O75387 MED25-210ENST00000612854 801 ntTSL 5 BASIC21.93■■□□□ 1.1
SLC43A1O75387 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SLC43A1O75387 MED25-214ENST00000622402 642 ntTSL 5 BASIC21.93■■□□□ 1.1
SLC43A1O75387 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.92■■□□□ 1.1
SLC43A1O75387 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC21.92■■□□□ 1.1
SLC43A1O75387 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
SLC43A1O75387 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SLC43A1O75387 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SLC43A1O75387 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
SLC43A1O75387 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC21.92■■□□□ 1.1
SLC43A1O75387 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
SLC43A1O75387 SRP68-213ENST00000629930 165 ntTSL 5 BASIC21.92■■□□□ 1.1
SLC43A1O75387 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SLC43A1O75387 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
SLC43A1O75387 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
SLC43A1O75387 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SLC43A1O75387 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC21.91■■□□□ 1.1
SLC43A1O75387 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC21.91■■□□□ 1.1
SLC43A1O75387 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SLC43A1O75387 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC21.9■■□□□ 1.1
SLC43A1O75387 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
SLC43A1O75387 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC21.9■■□□□ 1.1
SLC43A1O75387 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC21.9■■□□□ 1.1
SLC43A1O75387 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.9■■□□□ 1.1
SLC43A1O75387 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
SLC43A1O75387 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
SLC43A1O75387 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SLC43A1O75387 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.88■■□□□ 1.09
SLC43A1O75387 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.88■■□□□ 1.09
SLC43A1O75387 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
SLC43A1O75387 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.87■■□□□ 1.09
SLC43A1O75387 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
SLC43A1O75387 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SLC43A1O75387 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SLC43A1O75387 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SLC43A1O75387 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC21.86■■□□□ 1.09
SLC43A1O75387 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC21.86■■□□□ 1.09
SLC43A1O75387 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC21.86■■□□□ 1.09
SLC43A1O75387 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SLC43A1O75387 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
SLC43A1O75387 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.86■■□□□ 1.09
SLC43A1O75387 AP004609.3-201ENST00000610705 1884 ntBASIC21.86■■□□□ 1.09
SLC43A1O75387 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
SLC43A1O75387 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SLC43A1O75387 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC21.85■■□□□ 1.09
SLC43A1O75387 CEP120-209ENST00000515110 606 ntTSL 3 BASIC21.85■■□□□ 1.09
SLC43A1O75387 AC060814.1-201ENST00000554326 538 ntBASIC21.85■■□□□ 1.09
SLC43A1O75387 AC022413.1-201ENST00000624602 984 ntBASIC21.85■■□□□ 1.09
SLC43A1O75387 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
SLC43A1O75387 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SLC43A1O75387 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SLC43A1O75387 AC145676.1-201ENST00000514988 2004 ntBASIC21.85■■□□□ 1.09
SLC43A1O75387 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SLC43A1O75387 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.85■■□□□ 1.09
SLC43A1O75387 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SLC43A1O75387 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SLC43A1O75387 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SLC43A1O75387 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.84■■□□□ 1.09
SLC43A1O75387 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SLC43A1O75387 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC21.83■■□□□ 1.09
SLC43A1O75387 AC142472.1-201ENST00000612013 1741 ntBASIC21.83■■□□□ 1.09
SLC43A1O75387 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SLC43A1O75387 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SLC43A1O75387 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
SLC43A1O75387 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
SLC43A1O75387 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.83■■□□□ 1.08
SLC43A1O75387 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
SLC43A1O75387 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
SLC43A1O75387 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
SLC43A1O75387 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SLC43A1O75387 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms