Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC20.69■□□□□ 0.9
SSNA1O43805 AC006077.2-201ENST00000623591 457 ntBASIC20.69■□□□□ 0.9
SSNA1O43805 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SSNA1O43805 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SSNA1O43805 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SSNA1O43805 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SSNA1O43805 AC068473.5-201ENST00000616428 2072 ntBASIC20.68■□□□□ 0.9
SSNA1O43805 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SSNA1O43805 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
SSNA1O43805 AC138932.3-201ENST00000567634 1902 ntBASIC20.67■□□□□ 0.9
SSNA1O43805 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SSNA1O43805 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SSNA1O43805 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC20.67■□□□□ 0.9
SSNA1O43805 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SSNA1O43805 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SSNA1O43805 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.66■□□□□ 0.9
SSNA1O43805 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
SSNA1O43805 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.66■□□□□ 0.9
SSNA1O43805 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
SSNA1O43805 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
SSNA1O43805 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SSNA1O43805 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SSNA1O43805 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SSNA1O43805 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SSNA1O43805 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SSNA1O43805 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC20.65■□□□□ 0.9
SSNA1O43805 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SSNA1O43805 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
SSNA1O43805 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SSNA1O43805 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
SSNA1O43805 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.64■□□□□ 0.9
SSNA1O43805 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SSNA1O43805 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SSNA1O43805 AC022211.4-201ENST00000625094 2161 ntBASIC20.63■□□□□ 0.89
SSNA1O43805 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SSNA1O43805 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
SSNA1O43805 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SSNA1O43805 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
SSNA1O43805 PKD1P6-201ENST00000343738 4769 ntBASIC20.62■□□□□ 0.89
SSNA1O43805 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC20.62■□□□□ 0.89
SSNA1O43805 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SSNA1O43805 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SSNA1O43805 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.62■□□□□ 0.89
SSNA1O43805 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SSNA1O43805 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SSNA1O43805 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SSNA1O43805 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SSNA1O43805 AL031258.1-201ENST00000623562 325 ntBASIC20.61■□□□□ 0.89
SSNA1O43805 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
SSNA1O43805 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SSNA1O43805 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SSNA1O43805 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SSNA1O43805 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.61■□□□□ 0.89
SSNA1O43805 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.6■□□□□ 0.89
SSNA1O43805 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
SSNA1O43805 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SSNA1O43805 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SSNA1O43805 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
SSNA1O43805 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC20.59■□□□□ 0.89
SSNA1O43805 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
SSNA1O43805 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SSNA1O43805 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SSNA1O43805 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.59■□□□□ 0.89
SSNA1O43805 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SSNA1O43805 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.58■□□□□ 0.89
SSNA1O43805 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SSNA1O43805 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SSNA1O43805 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SSNA1O43805 CLDN5-201ENST00000403084 2357 ntBASIC20.58■□□□□ 0.89
SSNA1O43805 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SSNA1O43805 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.88
SSNA1O43805 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SSNA1O43805 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.57■□□□□ 0.88
SSNA1O43805 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SSNA1O43805 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SSNA1O43805 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SSNA1O43805 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SSNA1O43805 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
SSNA1O43805 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SSNA1O43805 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
SSNA1O43805 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SSNA1O43805 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SSNA1O43805 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SSNA1O43805 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.56■□□□□ 0.88
SSNA1O43805 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SSNA1O43805 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SSNA1O43805 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SSNA1O43805 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SSNA1O43805 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.56■□□□□ 0.88
SSNA1O43805 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SSNA1O43805 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC20.55■□□□□ 0.88
SSNA1O43805 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SSNA1O43805 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SSNA1O43805 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SSNA1O43805 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.55■□□□□ 0.88
SSNA1O43805 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC20.54■□□□□ 0.88
SSNA1O43805 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SSNA1O43805 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SSNA1O43805 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.54■□□□□ 0.88
SSNA1O43805 MEST-211ENST00000437945 1455 ntTSL 5 BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms