Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
SNAI2O43623 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
SNAI2O43623 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC18■□□□□ 0.47
SNAI2O43623 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SNAI2O43623 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
SNAI2O43623 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
SNAI2O43623 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
SNAI2O43623 AC133561.1-201ENST00000568600 2415 ntBASIC17.99■□□□□ 0.47
SNAI2O43623 SUZ12P1-203ENST00000578195 985 ntBASIC17.99■□□□□ 0.47
SNAI2O43623 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC17.99■□□□□ 0.47
SNAI2O43623 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC17.99■□□□□ 0.47
SNAI2O43623 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SNAI2O43623 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SNAI2O43623 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SNAI2O43623 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC17.98■□□□□ 0.47
SNAI2O43623 WHAMMP3-201ENST00000611636 1609 ntBASIC17.98■□□□□ 0.47
SNAI2O43623 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC17.98■□□□□ 0.47
SNAI2O43623 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SNAI2O43623 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SNAI2O43623 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SNAI2O43623 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
SNAI2O43623 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
SNAI2O43623 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SNAI2O43623 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC17.97■□□□□ 0.47
SNAI2O43623 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC17.97■□□□□ 0.47
SNAI2O43623 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SNAI2O43623 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SNAI2O43623 PEX7-203ENST00000541292 945 ntTSL 5 BASIC17.97■□□□□ 0.47
SNAI2O43623 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SNAI2O43623 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SNAI2O43623 CEBPA-AS1-201ENST00000592982 2198 ntBASIC17.97■□□□□ 0.47
SNAI2O43623 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SNAI2O43623 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SNAI2O43623 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SNAI2O43623 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SNAI2O43623 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SNAI2O43623 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SNAI2O43623 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SNAI2O43623 RARA-203ENST00000394086 2008 ntTSL 2 BASIC17.95■□□□□ 0.46
SNAI2O43623 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SNAI2O43623 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC17.95■□□□□ 0.46
SNAI2O43623 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SNAI2O43623 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC17.95■□□□□ 0.46
SNAI2O43623 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SNAI2O43623 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SNAI2O43623 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SNAI2O43623 AC110285.7-201ENST00000624417 1536 ntBASIC17.94■□□□□ 0.46
SNAI2O43623 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
SNAI2O43623 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC17.94■□□□□ 0.46
SNAI2O43623 DUX4L28-201ENST00000623687 678 ntBASIC17.94■□□□□ 0.46
SNAI2O43623 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
SNAI2O43623 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SNAI2O43623 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SNAI2O43623 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SNAI2O43623 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
SNAI2O43623 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
SNAI2O43623 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC17.94■□□□□ 0.46
SNAI2O43623 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNAI2O43623 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNAI2O43623 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNAI2O43623 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SNAI2O43623 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SNAI2O43623 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
SNAI2O43623 AC010501.1-201ENST00000606270 1962 ntBASIC17.93■□□□□ 0.46
SNAI2O43623 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SNAI2O43623 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNAI2O43623 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
SNAI2O43623 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC17.92■□□□□ 0.46
SNAI2O43623 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
SNAI2O43623 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SNAI2O43623 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SNAI2O43623 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC17.92■□□□□ 0.46
SNAI2O43623 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SNAI2O43623 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SNAI2O43623 ERN1-208ENST00000606895 2068 ntBASIC17.91■□□□□ 0.46
SNAI2O43623 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
SNAI2O43623 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC17.91■□□□□ 0.46
SNAI2O43623 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SNAI2O43623 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SNAI2O43623 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SNAI2O43623 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SNAI2O43623 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
SNAI2O43623 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC17.91■□□□□ 0.46
SNAI2O43623 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SNAI2O43623 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SNAI2O43623 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SNAI2O43623 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SNAI2O43623 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SNAI2O43623 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SNAI2O43623 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
SNAI2O43623 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
SNAI2O43623 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
SNAI2O43623 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SNAI2O43623 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SNAI2O43623 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
SNAI2O43623 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC17.89■□□□□ 0.45
SNAI2O43623 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC17.89■□□□□ 0.45
SNAI2O43623 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SNAI2O43623 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SNAI2O43623 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms