Protein–RNA interactions for Protein: O00629

KPNA4, Importin subunit alpha-3, humanhuman

Predicted RBP Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA4O00629 CHST11-202ENST00000546689 756 ntTSL 2 BASIC22.52■■□□□ 1.2
KPNA4O00629 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
KPNA4O00629 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC22.52■■□□□ 1.19
KPNA4O00629 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
KPNA4O00629 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
KPNA4O00629 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
KPNA4O00629 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
KPNA4O00629 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
KPNA4O00629 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
KPNA4O00629 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
KPNA4O00629 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
KPNA4O00629 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC22.49■■□□□ 1.19
KPNA4O00629 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
KPNA4O00629 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC22.49■■□□□ 1.19
KPNA4O00629 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC22.49■■□□□ 1.19
KPNA4O00629 DUX4L13-201ENST00000554103 1267 ntBASIC22.49■■□□□ 1.19
KPNA4O00629 DUX4L15-201ENST00000611059 1267 ntBASIC22.49■■□□□ 1.19
KPNA4O00629 DUX4L23-201ENST00000615195 1269 ntBASIC22.49■■□□□ 1.19
KPNA4O00629 DUX4L24-201ENST00000617576 1269 ntBASIC22.49■■□□□ 1.19
KPNA4O00629 DUX4L22-201ENST00000618238 1269 ntBASIC22.49■■□□□ 1.19
KPNA4O00629 DUX4L20-201ENST00000619712 1269 ntBASIC22.49■■□□□ 1.19
KPNA4O00629 DUX4L21-201ENST00000622058 1269 ntBASIC22.49■■□□□ 1.19
KPNA4O00629 DUX4L10-201ENST00000622460 1267 ntBASIC22.49■■□□□ 1.19
KPNA4O00629 DUX4L25-201ENST00000624915 1269 ntBASIC22.49■■□□□ 1.19
KPNA4O00629 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
KPNA4O00629 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
KPNA4O00629 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
KPNA4O00629 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC22.48■■□□□ 1.19
KPNA4O00629 DUX4L11-201ENST00000611504 1267 ntBASIC22.48■■□□□ 1.19
KPNA4O00629 DUX4L12-201ENST00000614593 1267 ntBASIC22.48■■□□□ 1.19
KPNA4O00629 DUX4L14-201ENST00000621227 1267 ntBASIC22.48■■□□□ 1.19
KPNA4O00629 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
KPNA4O00629 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
KPNA4O00629 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
KPNA4O00629 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC22.47■■□□□ 1.19
KPNA4O00629 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
KPNA4O00629 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC22.47■■□□□ 1.19
KPNA4O00629 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
KPNA4O00629 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
KPNA4O00629 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
KPNA4O00629 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
KPNA4O00629 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
KPNA4O00629 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC22.47■■□□□ 1.19
KPNA4O00629 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
KPNA4O00629 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
KPNA4O00629 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC22.46■■□□□ 1.19
KPNA4O00629 MLEC-202ENST00000412616 841 ntTSL 3 BASIC22.46■■□□□ 1.19
KPNA4O00629 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC22.46■■□□□ 1.19
KPNA4O00629 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
KPNA4O00629 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
KPNA4O00629 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
KPNA4O00629 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
KPNA4O00629 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
KPNA4O00629 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
KPNA4O00629 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
KPNA4O00629 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC22.45■■□□□ 1.18
KPNA4O00629 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
KPNA4O00629 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC22.45■■□□□ 1.18
KPNA4O00629 AC142472.1-201ENST00000612013 1741 ntBASIC22.45■■□□□ 1.18
KPNA4O00629 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
KPNA4O00629 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
KPNA4O00629 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
KPNA4O00629 ZNRF2P2-203ENST00000454624 420 ntBASIC22.44■■□□□ 1.18
KPNA4O00629 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
KPNA4O00629 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
KPNA4O00629 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC22.43■■□□□ 1.18
KPNA4O00629 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
KPNA4O00629 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
KPNA4O00629 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC22.43■■□□□ 1.18
KPNA4O00629 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
KPNA4O00629 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
KPNA4O00629 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC22.43■■□□□ 1.18
KPNA4O00629 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC22.43■■□□□ 1.18
KPNA4O00629 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC22.43■■□□□ 1.18
KPNA4O00629 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC22.42■■□□□ 1.18
KPNA4O00629 AC133561.1-201ENST00000568600 2415 ntBASIC22.42■■□□□ 1.18
KPNA4O00629 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
KPNA4O00629 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
KPNA4O00629 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC22.42■■□□□ 1.18
KPNA4O00629 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
KPNA4O00629 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC22.42■■□□□ 1.18
KPNA4O00629 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
KPNA4O00629 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
KPNA4O00629 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
KPNA4O00629 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
KPNA4O00629 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
KPNA4O00629 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
KPNA4O00629 AC012676.1-201ENST00000574705 1949 ntBASIC22.4■■□□□ 1.18
KPNA4O00629 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC22.4■■□□□ 1.18
KPNA4O00629 LINC00543-201ENST00000567234 1845 ntBASIC22.4■■□□□ 1.18
KPNA4O00629 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
KPNA4O00629 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
KPNA4O00629 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC22.39■■□□□ 1.18
KPNA4O00629 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC22.39■■□□□ 1.18
KPNA4O00629 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
KPNA4O00629 AC092803.2-201ENST00000564287 1899 ntBASIC22.39■■□□□ 1.18
KPNA4O00629 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC22.39■■□□□ 1.18
KPNA4O00629 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
KPNA4O00629 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
KPNA4O00629 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC22.39■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms