Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
TNFRSF11BO00300 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC22.4■■□□□ 1.18
TNFRSF11BO00300 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
TNFRSF11BO00300 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
TNFRSF11BO00300 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC22.4■■□□□ 1.18
TNFRSF11BO00300 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC22.4■■□□□ 1.18
TNFRSF11BO00300 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
TNFRSF11BO00300 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
TNFRSF11BO00300 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC22.39■■□□□ 1.18
TNFRSF11BO00300 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
TNFRSF11BO00300 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.17
TNFRSF11BO00300 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC22.39■■□□□ 1.17
TNFRSF11BO00300 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC22.39■■□□□ 1.17
TNFRSF11BO00300 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
TNFRSF11BO00300 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
TNFRSF11BO00300 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
TNFRSF11BO00300 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
TNFRSF11BO00300 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
TNFRSF11BO00300 BOD1-206ENST00000480951 814 ntTSL 2 BASIC22.38■■□□□ 1.17
TNFRSF11BO00300 AC021231.2-201ENST00000594613 730 ntBASIC22.38■■□□□ 1.17
TNFRSF11BO00300 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
TNFRSF11BO00300 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC22.38■■□□□ 1.17
TNFRSF11BO00300 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
TNFRSF11BO00300 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
TNFRSF11BO00300 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
TNFRSF11BO00300 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC22.37■■□□□ 1.17
TNFRSF11BO00300 AC022211.4-201ENST00000625094 2161 ntBASIC22.37■■□□□ 1.17
TNFRSF11BO00300 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
TNFRSF11BO00300 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
TNFRSF11BO00300 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
TNFRSF11BO00300 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC22.36■■□□□ 1.17
TNFRSF11BO00300 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
TNFRSF11BO00300 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC22.36■■□□□ 1.17
TNFRSF11BO00300 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
TNFRSF11BO00300 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
TNFRSF11BO00300 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
TNFRSF11BO00300 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC22.36■■□□□ 1.17
TNFRSF11BO00300 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC22.36■■□□□ 1.17
TNFRSF11BO00300 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
TNFRSF11BO00300 THRA-202ENST00000394121 2260 ntTSL 2 BASIC22.35■■□□□ 1.17
TNFRSF11BO00300 AL162393.1-201ENST00000437852 946 ntBASIC22.35■■□□□ 1.17
TNFRSF11BO00300 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
TNFRSF11BO00300 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
TNFRSF11BO00300 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
TNFRSF11BO00300 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
TNFRSF11BO00300 AC138932.3-201ENST00000567634 1902 ntBASIC22.34■■□□□ 1.17
TNFRSF11BO00300 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
TNFRSF11BO00300 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC22.34■■□□□ 1.17
TNFRSF11BO00300 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC22.34■■□□□ 1.17
TNFRSF11BO00300 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC22.34■■□□□ 1.17
TNFRSF11BO00300 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
TNFRSF11BO00300 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
TNFRSF11BO00300 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
TNFRSF11BO00300 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
TNFRSF11BO00300 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
TNFRSF11BO00300 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
TNFRSF11BO00300 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
TNFRSF11BO00300 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC22.33■■□□□ 1.17
TNFRSF11BO00300 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC22.33■■□□□ 1.16
TNFRSF11BO00300 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC22.32■■□□□ 1.16
TNFRSF11BO00300 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
TNFRSF11BO00300 DUX4L29-201ENST00000425409 679 ntBASIC22.32■■□□□ 1.16
TNFRSF11BO00300 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC22.32■■□□□ 1.16
TNFRSF11BO00300 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
TNFRSF11BO00300 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
TNFRSF11BO00300 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC22.32■■□□□ 1.16
TNFRSF11BO00300 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
TNFRSF11BO00300 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC22.31■■□□□ 1.16
TNFRSF11BO00300 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC22.31■■□□□ 1.16
TNFRSF11BO00300 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
TNFRSF11BO00300 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
TNFRSF11BO00300 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC22.3■■□□□ 1.16
TNFRSF11BO00300 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC22.3■■□□□ 1.16
TNFRSF11BO00300 AL139125.2-201ENST00000623134 1869 ntBASIC22.3■■□□□ 1.16
TNFRSF11BO00300 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
TNFRSF11BO00300 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
TNFRSF11BO00300 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC22.29■■□□□ 1.16
TNFRSF11BO00300 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
TNFRSF11BO00300 AC096887.2-201ENST00000623443 1957 ntBASIC22.29■■□□□ 1.16
TNFRSF11BO00300 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
TNFRSF11BO00300 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
TNFRSF11BO00300 PREB-202ENST00000406567 1910 ntTSL 5 BASIC22.28■■□□□ 1.16
TNFRSF11BO00300 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
TNFRSF11BO00300 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
TNFRSF11BO00300 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC22.28■■□□□ 1.16
TNFRSF11BO00300 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
TNFRSF11BO00300 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
TNFRSF11BO00300 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
TNFRSF11BO00300 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
TNFRSF11BO00300 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC22.27■■□□□ 1.16
TNFRSF11BO00300 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
TNFRSF11BO00300 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
TNFRSF11BO00300 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC22.27■■□□□ 1.16
TNFRSF11BO00300 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
TNFRSF11BO00300 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
TNFRSF11BO00300 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TNFRSF11BO00300 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC22.26■■□□□ 1.15
TNFRSF11BO00300 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
TNFRSF11BO00300 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
TNFRSF11BO00300 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC22.26■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms