Protein–RNA interactions for Protein: A6H8M9

CDHR4, Cadherin-related family member 4, humanhuman

Predictions only

Length 788 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4A6H8M9 PVT1-219ENST00000523427 938 ntTSL 3 BASIC22.41■■□□□ 1.18
CDHR4A6H8M9 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC22.41■■□□□ 1.18
CDHR4A6H8M9 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CDHR4A6H8M9 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC22.41■■□□□ 1.18
CDHR4A6H8M9 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
CDHR4A6H8M9 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
CDHR4A6H8M9 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CDHR4A6H8M9 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
CDHR4A6H8M9 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
CDHR4A6H8M9 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
CDHR4A6H8M9 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
CDHR4A6H8M9 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC22.39■■□□□ 1.17
CDHR4A6H8M9 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CDHR4A6H8M9 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CDHR4A6H8M9 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CDHR4A6H8M9 MIR639-201ENST00000384974 98 ntBASIC22.38■■□□□ 1.17
CDHR4A6H8M9 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CDHR4A6H8M9 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CDHR4A6H8M9 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC22.38■■□□□ 1.17
CDHR4A6H8M9 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CDHR4A6H8M9 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CDHR4A6H8M9 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC22.37■■□□□ 1.17
CDHR4A6H8M9 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CDHR4A6H8M9 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CDHR4A6H8M9 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CDHR4A6H8M9 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CDHR4A6H8M9 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CDHR4A6H8M9 ERN1-208ENST00000606895 2068 ntBASIC22.36■■□□□ 1.17
CDHR4A6H8M9 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC22.36■■□□□ 1.17
CDHR4A6H8M9 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC22.36■■□□□ 1.17
CDHR4A6H8M9 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
CDHR4A6H8M9 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CDHR4A6H8M9 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
CDHR4A6H8M9 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CDHR4A6H8M9 AC010501.1-201ENST00000606270 1962 ntBASIC22.36■■□□□ 1.17
CDHR4A6H8M9 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
CDHR4A6H8M9 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC22.35■■□□□ 1.17
CDHR4A6H8M9 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC22.35■■□□□ 1.17
CDHR4A6H8M9 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CDHR4A6H8M9 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
CDHR4A6H8M9 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
CDHR4A6H8M9 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CDHR4A6H8M9 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC22.35■■□□□ 1.17
CDHR4A6H8M9 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CDHR4A6H8M9 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
CDHR4A6H8M9 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CDHR4A6H8M9 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CDHR4A6H8M9 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CDHR4A6H8M9 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
CDHR4A6H8M9 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CDHR4A6H8M9 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CDHR4A6H8M9 RPS2-202ENST00000526522 924 ntTSL 2 BASIC22.34■■□□□ 1.17
CDHR4A6H8M9 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CDHR4A6H8M9 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CDHR4A6H8M9 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
CDHR4A6H8M9 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
CDHR4A6H8M9 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
CDHR4A6H8M9 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CDHR4A6H8M9 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC22.34■■□□□ 1.17
CDHR4A6H8M9 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
CDHR4A6H8M9 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
CDHR4A6H8M9 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC22.33■■□□□ 1.16
CDHR4A6H8M9 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC22.33■■□□□ 1.16
CDHR4A6H8M9 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CDHR4A6H8M9 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CDHR4A6H8M9 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CDHR4A6H8M9 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC22.32■■□□□ 1.16
CDHR4A6H8M9 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CDHR4A6H8M9 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC22.31■■□□□ 1.16
CDHR4A6H8M9 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CDHR4A6H8M9 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CDHR4A6H8M9 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CDHR4A6H8M9 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CDHR4A6H8M9 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CDHR4A6H8M9 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CDHR4A6H8M9 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
CDHR4A6H8M9 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
CDHR4A6H8M9 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC22.3■■□□□ 1.16
CDHR4A6H8M9 AC020928.2-201ENST00000588717 2197 ntBASIC22.3■■□□□ 1.16
CDHR4A6H8M9 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CDHR4A6H8M9 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CDHR4A6H8M9 AC060814.1-201ENST00000554326 538 ntBASIC22.29■■□□□ 1.16
CDHR4A6H8M9 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CDHR4A6H8M9 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC22.29■■□□□ 1.16
CDHR4A6H8M9 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC22.29■■□□□ 1.16
CDHR4A6H8M9 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC22.29■■□□□ 1.16
CDHR4A6H8M9 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CDHR4A6H8M9 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CDHR4A6H8M9 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CDHR4A6H8M9 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CDHR4A6H8M9 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC22.28■■□□□ 1.16
CDHR4A6H8M9 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CDHR4A6H8M9 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CDHR4A6H8M9 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC22.28■■□□□ 1.16
CDHR4A6H8M9 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CDHR4A6H8M9 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC22.28■■□□□ 1.16
CDHR4A6H8M9 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC22.28■■□□□ 1.16
CDHR4A6H8M9 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
CDHR4A6H8M9 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CDHR4A6H8M9 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms