Protein–RNA interactions for Protein: A6H8M9

CDHR4, Cadherin-related family member 4, humanhuman

Predictions only

Length 788 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4A6H8M9 PVT1-219ENST00000523427 938 ntTSL 3 BASIC22.41■■□□□ 1.18
CDHR4A6H8M9 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC22.41■■□□□ 1.18
CDHR4A6H8M9 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CDHR4A6H8M9 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC22.41■■□□□ 1.18
CDHR4A6H8M9 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
CDHR4A6H8M9 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
CDHR4A6H8M9 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CDHR4A6H8M9 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
CDHR4A6H8M9 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
CDHR4A6H8M9 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
CDHR4A6H8M9 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
CDHR4A6H8M9 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC22.39■■□□□ 1.17
CDHR4A6H8M9 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CDHR4A6H8M9 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CDHR4A6H8M9 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CDHR4A6H8M9 MIR639-201ENST00000384974 98 ntBASIC22.38■■□□□ 1.17
CDHR4A6H8M9 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CDHR4A6H8M9 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CDHR4A6H8M9 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC22.38■■□□□ 1.17
CDHR4A6H8M9 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CDHR4A6H8M9 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CDHR4A6H8M9 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC22.37■■□□□ 1.17
CDHR4A6H8M9 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CDHR4A6H8M9 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CDHR4A6H8M9 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CDHR4A6H8M9 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CDHR4A6H8M9 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CDHR4A6H8M9 ERN1-208ENST00000606895 2068 ntBASIC22.36■■□□□ 1.17
CDHR4A6H8M9 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC22.36■■□□□ 1.17
CDHR4A6H8M9 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC22.36■■□□□ 1.17
CDHR4A6H8M9 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
CDHR4A6H8M9 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CDHR4A6H8M9 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
CDHR4A6H8M9 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CDHR4A6H8M9 AC010501.1-201ENST00000606270 1962 ntBASIC22.36■■□□□ 1.17
CDHR4A6H8M9 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
CDHR4A6H8M9 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC22.35■■□□□ 1.17
CDHR4A6H8M9 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC22.35■■□□□ 1.17
CDHR4A6H8M9 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CDHR4A6H8M9 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
CDHR4A6H8M9 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
CDHR4A6H8M9 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CDHR4A6H8M9 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC22.35■■□□□ 1.17
CDHR4A6H8M9 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CDHR4A6H8M9 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
CDHR4A6H8M9 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CDHR4A6H8M9 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CDHR4A6H8M9 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CDHR4A6H8M9 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
CDHR4A6H8M9 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CDHR4A6H8M9 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CDHR4A6H8M9 RPS2-202ENST00000526522 924 ntTSL 2 BASIC22.34■■□□□ 1.17
CDHR4A6H8M9 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CDHR4A6H8M9 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CDHR4A6H8M9 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
CDHR4A6H8M9 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
CDHR4A6H8M9 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
CDHR4A6H8M9 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CDHR4A6H8M9 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC22.34■■□□□ 1.17
CDHR4A6H8M9 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
CDHR4A6H8M9 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
CDHR4A6H8M9 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC22.33■■□□□ 1.16
CDHR4A6H8M9 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC22.33■■□□□ 1.16
CDHR4A6H8M9 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CDHR4A6H8M9 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CDHR4A6H8M9 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CDHR4A6H8M9 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC22.32■■□□□ 1.16
CDHR4A6H8M9 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CDHR4A6H8M9 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC22.31■■□□□ 1.16
CDHR4A6H8M9 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CDHR4A6H8M9 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CDHR4A6H8M9 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CDHR4A6H8M9 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CDHR4A6H8M9 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CDHR4A6H8M9 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CDHR4A6H8M9 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
CDHR4A6H8M9 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
CDHR4A6H8M9 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC22.3■■□□□ 1.16
CDHR4A6H8M9 AC020928.2-201ENST00000588717 2197 ntBASIC22.3■■□□□ 1.16
CDHR4A6H8M9 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CDHR4A6H8M9 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CDHR4A6H8M9 AC060814.1-201ENST00000554326 538 ntBASIC22.29■■□□□ 1.16
CDHR4A6H8M9 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CDHR4A6H8M9 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC22.29■■□□□ 1.16
CDHR4A6H8M9 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC22.29■■□□□ 1.16
CDHR4A6H8M9 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC22.29■■□□□ 1.16
CDHR4A6H8M9 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CDHR4A6H8M9 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CDHR4A6H8M9 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CDHR4A6H8M9 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CDHR4A6H8M9 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC22.28■■□□□ 1.16
CDHR4A6H8M9 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CDHR4A6H8M9 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CDHR4A6H8M9 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC22.28■■□□□ 1.16
CDHR4A6H8M9 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CDHR4A6H8M9 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC22.28■■□□□ 1.16
CDHR4A6H8M9 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC22.28■■□□□ 1.16
CDHR4A6H8M9 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
CDHR4A6H8M9 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CDHR4A6H8M9 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 10.6 ms