Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC22.88■■□□□ 1.25
TCRBV3S1A0A5B6 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC22.88■■□□□ 1.25
TCRBV3S1A0A5B6 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
TCRBV3S1A0A5B6 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC22.87■■□□□ 1.25
TCRBV3S1A0A5B6 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
TCRBV3S1A0A5B6 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
TCRBV3S1A0A5B6 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
TCRBV3S1A0A5B6 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
TCRBV3S1A0A5B6 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC22.86■■□□□ 1.25
TCRBV3S1A0A5B6 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC22.86■■□□□ 1.25
TCRBV3S1A0A5B6 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
TCRBV3S1A0A5B6 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
TCRBV3S1A0A5B6 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC22.86■■□□□ 1.25
TCRBV3S1A0A5B6 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
TCRBV3S1A0A5B6 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC22.86■■□□□ 1.25
TCRBV3S1A0A5B6 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC22.85■■□□□ 1.25
TCRBV3S1A0A5B6 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
TCRBV3S1A0A5B6 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
TCRBV3S1A0A5B6 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC22.85■■□□□ 1.25
TCRBV3S1A0A5B6 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC22.85■■□□□ 1.25
TCRBV3S1A0A5B6 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
TCRBV3S1A0A5B6 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
TCRBV3S1A0A5B6 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
TCRBV3S1A0A5B6 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC22.84■■□□□ 1.25
TCRBV3S1A0A5B6 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC22.84■■□□□ 1.25
TCRBV3S1A0A5B6 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
TCRBV3S1A0A5B6 AC012676.1-201ENST00000574705 1949 ntBASIC22.84■■□□□ 1.25
TCRBV3S1A0A5B6 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
TCRBV3S1A0A5B6 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC22.84■■□□□ 1.25
TCRBV3S1A0A5B6 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC22.83■■□□□ 1.25
TCRBV3S1A0A5B6 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.25
TCRBV3S1A0A5B6 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
TCRBV3S1A0A5B6 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC22.83■■□□□ 1.25
TCRBV3S1A0A5B6 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC22.83■■□□□ 1.25
TCRBV3S1A0A5B6 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
TCRBV3S1A0A5B6 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
TCRBV3S1A0A5B6 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
TCRBV3S1A0A5B6 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
TCRBV3S1A0A5B6 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
TCRBV3S1A0A5B6 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
TCRBV3S1A0A5B6 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC22.81■■□□□ 1.24
TCRBV3S1A0A5B6 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
TCRBV3S1A0A5B6 CALM3-209ENST00000597743 577 ntTSL 4 BASIC22.81■■□□□ 1.24
TCRBV3S1A0A5B6 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
TCRBV3S1A0A5B6 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
TCRBV3S1A0A5B6 AC096887.2-201ENST00000623443 1957 ntBASIC22.81■■□□□ 1.24
TCRBV3S1A0A5B6 AC110285.7-201ENST00000624417 1536 ntBASIC22.81■■□□□ 1.24
TCRBV3S1A0A5B6 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC22.81■■□□□ 1.24
TCRBV3S1A0A5B6 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC22.81■■□□□ 1.24
TCRBV3S1A0A5B6 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC22.81■■□□□ 1.24
TCRBV3S1A0A5B6 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC22.8■■□□□ 1.24
TCRBV3S1A0A5B6 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
TCRBV3S1A0A5B6 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
TCRBV3S1A0A5B6 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
TCRBV3S1A0A5B6 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC22.79■■□□□ 1.24
TCRBV3S1A0A5B6 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC22.79■■□□□ 1.24
TCRBV3S1A0A5B6 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC22.79■■□□□ 1.24
TCRBV3S1A0A5B6 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
TCRBV3S1A0A5B6 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC22.79■■□□□ 1.24
TCRBV3S1A0A5B6 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
TCRBV3S1A0A5B6 AC097358.2-201ENST00000607541 1159 ntBASIC22.79■■□□□ 1.24
TCRBV3S1A0A5B6 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
TCRBV3S1A0A5B6 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
TCRBV3S1A0A5B6 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
TCRBV3S1A0A5B6 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
TCRBV3S1A0A5B6 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
TCRBV3S1A0A5B6 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
TCRBV3S1A0A5B6 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC22.78■■□□□ 1.24
TCRBV3S1A0A5B6 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
TCRBV3S1A0A5B6 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC22.78■■□□□ 1.24
TCRBV3S1A0A5B6 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
TCRBV3S1A0A5B6 AC005559.1-201ENST00000589661 871 ntBASIC22.77■■□□□ 1.24
TCRBV3S1A0A5B6 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC22.77■■□□□ 1.24
TCRBV3S1A0A5B6 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC22.77■■□□□ 1.23
TCRBV3S1A0A5B6 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
TCRBV3S1A0A5B6 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC22.76■■□□□ 1.23
TCRBV3S1A0A5B6 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
TCRBV3S1A0A5B6 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC22.76■■□□□ 1.23
TCRBV3S1A0A5B6 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
TCRBV3S1A0A5B6 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
TCRBV3S1A0A5B6 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC22.76■■□□□ 1.23
TCRBV3S1A0A5B6 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC22.76■■□□□ 1.23
TCRBV3S1A0A5B6 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC22.76■■□□□ 1.23
TCRBV3S1A0A5B6 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
TCRBV3S1A0A5B6 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
TCRBV3S1A0A5B6 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC22.75■■□□□ 1.23
TCRBV3S1A0A5B6 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC22.75■■□□□ 1.23
TCRBV3S1A0A5B6 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
TCRBV3S1A0A5B6 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC22.75■■□□□ 1.23
TCRBV3S1A0A5B6 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC22.75■■□□□ 1.23
TCRBV3S1A0A5B6 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC22.75■■□□□ 1.23
TCRBV3S1A0A5B6 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
TCRBV3S1A0A5B6 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC22.74■■□□□ 1.23
TCRBV3S1A0A5B6 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
TCRBV3S1A0A5B6 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC22.74■■□□□ 1.23
TCRBV3S1A0A5B6 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC22.74■■□□□ 1.23
TCRBV3S1A0A5B6 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
TCRBV3S1A0A5B6 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
TCRBV3S1A0A5B6 EED-207ENST00000528180 1745 ntTSL 5 BASIC22.74■■□□□ 1.23
TCRBV3S1A0A5B6 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 132.6 ms