Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC24.2■■□□□ 1.46
TRBV5-4A0A0C4DH59 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC24.2■■□□□ 1.46
TRBV5-4A0A0C4DH59 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
TRBV5-4A0A0C4DH59 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC24.19■■□□□ 1.46
TRBV5-4A0A0C4DH59 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC24.19■■□□□ 1.46
TRBV5-4A0A0C4DH59 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
TRBV5-4A0A0C4DH59 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC24.19■■□□□ 1.46
TRBV5-4A0A0C4DH59 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
TRBV5-4A0A0C4DH59 HSD17B1P1-201ENST00000590052 955 ntBASIC24.19■■□□□ 1.46
TRBV5-4A0A0C4DH59 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC24.19■■□□□ 1.46
TRBV5-4A0A0C4DH59 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC24.19■■□□□ 1.46
TRBV5-4A0A0C4DH59 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC24.19■■□□□ 1.46
TRBV5-4A0A0C4DH59 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
TRBV5-4A0A0C4DH59 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC24.18■■□□□ 1.46
TRBV5-4A0A0C4DH59 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
TRBV5-4A0A0C4DH59 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC24.17■■□□□ 1.46
TRBV5-4A0A0C4DH59 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
TRBV5-4A0A0C4DH59 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC24.17■■□□□ 1.46
TRBV5-4A0A0C4DH59 MIR3960-201ENST00000583311 91 ntBASIC24.17■■□□□ 1.46
TRBV5-4A0A0C4DH59 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
TRBV5-4A0A0C4DH59 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
TRBV5-4A0A0C4DH59 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC24.16■■□□□ 1.46
TRBV5-4A0A0C4DH59 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
TRBV5-4A0A0C4DH59 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC24.16■■□□□ 1.46
TRBV5-4A0A0C4DH59 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
TRBV5-4A0A0C4DH59 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC24.16■■□□□ 1.46
TRBV5-4A0A0C4DH59 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
TRBV5-4A0A0C4DH59 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
TRBV5-4A0A0C4DH59 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
TRBV5-4A0A0C4DH59 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
TRBV5-4A0A0C4DH59 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
TRBV5-4A0A0C4DH59 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
TRBV5-4A0A0C4DH59 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
TRBV5-4A0A0C4DH59 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
TRBV5-4A0A0C4DH59 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC24.15■■□□□ 1.46
TRBV5-4A0A0C4DH59 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC24.15■■□□□ 1.46
TRBV5-4A0A0C4DH59 AC091060.1-201ENST00000623524 1766 ntBASIC24.15■■□□□ 1.46
TRBV5-4A0A0C4DH59 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC24.15■■□□□ 1.46
TRBV5-4A0A0C4DH59 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC24.15■■□□□ 1.46
TRBV5-4A0A0C4DH59 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.46
TRBV5-4A0A0C4DH59 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
TRBV5-4A0A0C4DH59 AC007029.1-201ENST00000604183 313 ntBASIC24.14■■□□□ 1.45
TRBV5-4A0A0C4DH59 CREM-210ENST00000374721 2020 ntTSL 5 BASIC24.13■■□□□ 1.45
TRBV5-4A0A0C4DH59 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC24.13■■□□□ 1.45
TRBV5-4A0A0C4DH59 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
TRBV5-4A0A0C4DH59 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
TRBV5-4A0A0C4DH59 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
TRBV5-4A0A0C4DH59 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
TRBV5-4A0A0C4DH59 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
TRBV5-4A0A0C4DH59 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
TRBV5-4A0A0C4DH59 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC24.12■■□□□ 1.45
TRBV5-4A0A0C4DH59 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
TRBV5-4A0A0C4DH59 AC092803.2-201ENST00000564287 1899 ntBASIC24.12■■□□□ 1.45
TRBV5-4A0A0C4DH59 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC24.12■■□□□ 1.45
TRBV5-4A0A0C4DH59 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC24.11■■□□□ 1.45
TRBV5-4A0A0C4DH59 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
TRBV5-4A0A0C4DH59 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC24.11■■□□□ 1.45
TRBV5-4A0A0C4DH59 RP9P-202ENST00000450133 1212 ntBASIC24.11■■□□□ 1.45
TRBV5-4A0A0C4DH59 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
TRBV5-4A0A0C4DH59 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
TRBV5-4A0A0C4DH59 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC24.11■■□□□ 1.45
TRBV5-4A0A0C4DH59 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
TRBV5-4A0A0C4DH59 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC24.1■■□□□ 1.45
TRBV5-4A0A0C4DH59 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
TRBV5-4A0A0C4DH59 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
TRBV5-4A0A0C4DH59 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC24.09■■□□□ 1.45
TRBV5-4A0A0C4DH59 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
TRBV5-4A0A0C4DH59 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
TRBV5-4A0A0C4DH59 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
TRBV5-4A0A0C4DH59 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
TRBV5-4A0A0C4DH59 RARRES2P2-201ENST00000394842 485 ntBASIC24.08■■□□□ 1.45
TRBV5-4A0A0C4DH59 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
TRBV5-4A0A0C4DH59 GFER-205ENST00000569451 517 ntTSL 5 BASIC24.08■■□□□ 1.45
TRBV5-4A0A0C4DH59 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
TRBV5-4A0A0C4DH59 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
TRBV5-4A0A0C4DH59 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
TRBV5-4A0A0C4DH59 AC093536.1-201ENST00000569153 554 ntBASIC24.07■■□□□ 1.44
TRBV5-4A0A0C4DH59 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC24.07■■□□□ 1.44
TRBV5-4A0A0C4DH59 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC24.07■■□□□ 1.44
TRBV5-4A0A0C4DH59 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC24.06■■□□□ 1.44
TRBV5-4A0A0C4DH59 AC145676.1-201ENST00000514988 2004 ntBASIC24.06■■□□□ 1.44
TRBV5-4A0A0C4DH59 DUSP8P4-201ENST00000399538 1761 ntBASIC24.06■■□□□ 1.44
TRBV5-4A0A0C4DH59 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
TRBV5-4A0A0C4DH59 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
TRBV5-4A0A0C4DH59 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
TRBV5-4A0A0C4DH59 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC24.05■■□□□ 1.44
TRBV5-4A0A0C4DH59 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC24.05■■□□□ 1.44
TRBV5-4A0A0C4DH59 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.44
TRBV5-4A0A0C4DH59 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC24.05■■□□□ 1.44
TRBV5-4A0A0C4DH59 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
TRBV5-4A0A0C4DH59 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
TRBV5-4A0A0C4DH59 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC24.04■■□□□ 1.44
TRBV5-4A0A0C4DH59 RAP2CP1-202ENST00000605179 643 ntBASIC24.04■■□□□ 1.44
TRBV5-4A0A0C4DH59 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC24.04■■□□□ 1.44
TRBV5-4A0A0C4DH59 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
TRBV5-4A0A0C4DH59 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
TRBV5-4A0A0C4DH59 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
TRBV5-4A0A0C4DH59 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
TRBV5-4A0A0C4DH59 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
TRBV5-4A0A0C4DH59 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms