Protein–RNA interactions for Protein: A0A0B4J274

TRAV20, T-cell receptor alpha variable 20 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV20A0A0B4J274 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TRAV20A0A0B4J274 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRAV20A0A0B4J274 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRAV20A0A0B4J274 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRAV20A0A0B4J274 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRAV20A0A0B4J274 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRAV20A0A0B4J274 RP9P-202ENST00000450133 1212 ntBASIC20.48■□□□□ 0.87
TRAV20A0A0B4J274 AL592293.1-201ENST00000502889 1188 ntBASIC20.48■□□□□ 0.87
TRAV20A0A0B4J274 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
TRAV20A0A0B4J274 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC20.48■□□□□ 0.87
TRAV20A0A0B4J274 AC129492.7-201ENST00000622992 756 ntBASIC20.48■□□□□ 0.87
TRAV20A0A0B4J274 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
TRAV20A0A0B4J274 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRAV20A0A0B4J274 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRAV20A0A0B4J274 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC20.47■□□□□ 0.87
TRAV20A0A0B4J274 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRAV20A0A0B4J274 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRAV20A0A0B4J274 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRAV20A0A0B4J274 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TRAV20A0A0B4J274 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
TRAV20A0A0B4J274 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC20.47■□□□□ 0.87
TRAV20A0A0B4J274 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
TRAV20A0A0B4J274 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC20.47■□□□□ 0.87
TRAV20A0A0B4J274 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRAV20A0A0B4J274 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRAV20A0A0B4J274 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
TRAV20A0A0B4J274 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRAV20A0A0B4J274 AC026202.3-201ENST00000600805 1127 ntBASIC20.46■□□□□ 0.87
TRAV20A0A0B4J274 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRAV20A0A0B4J274 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.87
TRAV20A0A0B4J274 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
TRAV20A0A0B4J274 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRAV20A0A0B4J274 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRAV20A0A0B4J274 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRAV20A0A0B4J274 MIR3960-201ENST00000583311 91 ntBASIC20.45■□□□□ 0.86
TRAV20A0A0B4J274 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.45■□□□□ 0.86
TRAV20A0A0B4J274 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TRAV20A0A0B4J274 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC20.44■□□□□ 0.86
TRAV20A0A0B4J274 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRAV20A0A0B4J274 PFN2-211ENST00000489155 636 ntTSL 4 BASIC20.44■□□□□ 0.86
TRAV20A0A0B4J274 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC20.44■□□□□ 0.86
TRAV20A0A0B4J274 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
TRAV20A0A0B4J274 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC20.43■□□□□ 0.86
TRAV20A0A0B4J274 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC20.43■□□□□ 0.86
TRAV20A0A0B4J274 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC20.43■□□□□ 0.86
TRAV20A0A0B4J274 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC20.43■□□□□ 0.86
TRAV20A0A0B4J274 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRAV20A0A0B4J274 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC20.42■□□□□ 0.86
TRAV20A0A0B4J274 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC20.42■□□□□ 0.86
TRAV20A0A0B4J274 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TRAV20A0A0B4J274 AC093536.1-201ENST00000569153 554 ntBASIC20.42■□□□□ 0.86
TRAV20A0A0B4J274 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRAV20A0A0B4J274 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRAV20A0A0B4J274 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TRAV20A0A0B4J274 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
TRAV20A0A0B4J274 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRAV20A0A0B4J274 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRAV20A0A0B4J274 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC20.41■□□□□ 0.86
TRAV20A0A0B4J274 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC20.41■□□□□ 0.86
TRAV20A0A0B4J274 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TRAV20A0A0B4J274 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.41■□□□□ 0.86
TRAV20A0A0B4J274 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
TRAV20A0A0B4J274 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRAV20A0A0B4J274 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRAV20A0A0B4J274 DUX4L18-201ENST00000553347 1267 ntBASIC20.4■□□□□ 0.86
TRAV20A0A0B4J274 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC20.4■□□□□ 0.86
TRAV20A0A0B4J274 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRAV20A0A0B4J274 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.39■□□□□ 0.86
TRAV20A0A0B4J274 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
TRAV20A0A0B4J274 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
TRAV20A0A0B4J274 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
TRAV20A0A0B4J274 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRAV20A0A0B4J274 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRAV20A0A0B4J274 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRAV20A0A0B4J274 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.39■□□□□ 0.85
TRAV20A0A0B4J274 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRAV20A0A0B4J274 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRAV20A0A0B4J274 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRAV20A0A0B4J274 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRAV20A0A0B4J274 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRAV20A0A0B4J274 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRAV20A0A0B4J274 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC20.38■□□□□ 0.85
TRAV20A0A0B4J274 RAP2CP1-202ENST00000605179 643 ntBASIC20.38■□□□□ 0.85
TRAV20A0A0B4J274 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRAV20A0A0B4J274 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
TRAV20A0A0B4J274 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRAV20A0A0B4J274 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
TRAV20A0A0B4J274 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TRAV20A0A0B4J274 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRAV20A0A0B4J274 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
TRAV20A0A0B4J274 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRAV20A0A0B4J274 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
TRAV20A0A0B4J274 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRAV20A0A0B4J274 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRAV20A0A0B4J274 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.36■□□□□ 0.85
TRAV20A0A0B4J274 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
TRAV20A0A0B4J274 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TRAV20A0A0B4J274 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TRAV20A0A0B4J274 RARRES2P1-201ENST00000474487 481 ntBASIC20.36■□□□□ 0.85
TRAV20A0A0B4J274 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 10.6 ms