Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
TRAV12-3A0A0B4J271 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
TRAV12-3A0A0B4J271 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC18■□□□□ 0.47
TRAV12-3A0A0B4J271 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC18■□□□□ 0.47
TRAV12-3A0A0B4J271 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC18■□□□□ 0.47
TRAV12-3A0A0B4J271 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC18■□□□□ 0.47
TRAV12-3A0A0B4J271 GDI1-215ENST00000630693 786 ntTSL 4 BASIC18■□□□□ 0.47
TRAV12-3A0A0B4J271 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRAV12-3A0A0B4J271 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
TRAV12-3A0A0B4J271 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC18■□□□□ 0.47
TRAV12-3A0A0B4J271 AL359258.2-201ENST00000564063 1566 ntBASIC18■□□□□ 0.47
TRAV12-3A0A0B4J271 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV12-3A0A0B4J271 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV12-3A0A0B4J271 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV12-3A0A0B4J271 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV12-3A0A0B4J271 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV12-3A0A0B4J271 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV12-3A0A0B4J271 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV12-3A0A0B4J271 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV12-3A0A0B4J271 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV12-3A0A0B4J271 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV12-3A0A0B4J271 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV12-3A0A0B4J271 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC17.98■□□□□ 0.47
TRAV12-3A0A0B4J271 MIR3648-2-201ENST00000581792 180 ntBASIC17.98■□□□□ 0.47
TRAV12-3A0A0B4J271 MIR3648-1-201ENST00000615959 180 ntBASIC17.98■□□□□ 0.47
TRAV12-3A0A0B4J271 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
TRAV12-3A0A0B4J271 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV12-3A0A0B4J271 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV12-3A0A0B4J271 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV12-3A0A0B4J271 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV12-3A0A0B4J271 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV12-3A0A0B4J271 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV12-3A0A0B4J271 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC17.97■□□□□ 0.47
TRAV12-3A0A0B4J271 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
TRAV12-3A0A0B4J271 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV12-3A0A0B4J271 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV12-3A0A0B4J271 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV12-3A0A0B4J271 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV12-3A0A0B4J271 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV12-3A0A0B4J271 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC17.96■□□□□ 0.47
TRAV12-3A0A0B4J271 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
TRAV12-3A0A0B4J271 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC17.96■□□□□ 0.47
TRAV12-3A0A0B4J271 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV12-3A0A0B4J271 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
TRAV12-3A0A0B4J271 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC17.96■□□□□ 0.47
TRAV12-3A0A0B4J271 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC17.96■□□□□ 0.47
TRAV12-3A0A0B4J271 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV12-3A0A0B4J271 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
TRAV12-3A0A0B4J271 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV12-3A0A0B4J271 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV12-3A0A0B4J271 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV12-3A0A0B4J271 AC016575.1-201ENST00000607026 382 ntBASIC17.95■□□□□ 0.46
TRAV12-3A0A0B4J271 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
TRAV12-3A0A0B4J271 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
TRAV12-3A0A0B4J271 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC17.94■□□□□ 0.46
TRAV12-3A0A0B4J271 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC17.94■□□□□ 0.46
TRAV12-3A0A0B4J271 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
TRAV12-3A0A0B4J271 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV12-3A0A0B4J271 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV12-3A0A0B4J271 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
TRAV12-3A0A0B4J271 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC17.94■□□□□ 0.46
TRAV12-3A0A0B4J271 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV12-3A0A0B4J271 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV12-3A0A0B4J271 MACF1-219ENST00000484793 834 ntTSL 2 BASIC17.93■□□□□ 0.46
TRAV12-3A0A0B4J271 METRNL-202ENST00000570778 967 ntTSL 5 BASIC17.93■□□□□ 0.46
TRAV12-3A0A0B4J271 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC17.93■□□□□ 0.46
TRAV12-3A0A0B4J271 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV12-3A0A0B4J271 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV12-3A0A0B4J271 AC020928.2-201ENST00000588717 2197 ntBASIC17.93■□□□□ 0.46
TRAV12-3A0A0B4J271 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC17.93■□□□□ 0.46
TRAV12-3A0A0B4J271 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
TRAV12-3A0A0B4J271 ERN1-208ENST00000606895 2068 ntBASIC17.92■□□□□ 0.46
TRAV12-3A0A0B4J271 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV12-3A0A0B4J271 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV12-3A0A0B4J271 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV12-3A0A0B4J271 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV12-3A0A0B4J271 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV12-3A0A0B4J271 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC17.91■□□□□ 0.46
TRAV12-3A0A0B4J271 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV12-3A0A0B4J271 AL359504.2-201ENST00000605506 1601 ntBASIC17.91■□□□□ 0.46
TRAV12-3A0A0B4J271 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
TRAV12-3A0A0B4J271 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
TRAV12-3A0A0B4J271 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV12-3A0A0B4J271 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV12-3A0A0B4J271 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC17.91■□□□□ 0.46
TRAV12-3A0A0B4J271 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV12-3A0A0B4J271 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV12-3A0A0B4J271 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV12-3A0A0B4J271 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV12-3A0A0B4J271 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV12-3A0A0B4J271 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC17.9■□□□□ 0.46
TRAV12-3A0A0B4J271 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
TRAV12-3A0A0B4J271 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV12-3A0A0B4J271 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV12-3A0A0B4J271 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV12-3A0A0B4J271 AC126177.7-201ENST00000547904 679 ntBASIC17.9■□□□□ 0.46
TRAV12-3A0A0B4J271 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV12-3A0A0B4J271 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
TRAV12-3A0A0B4J271 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV12-3A0A0B4J271 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms