Protein–RNA interactions for Protein: A0A0A6YYK1

TRAV8-1, T-cell receptor alpha variable 8-1 (Fragment), humanhuman

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-1A0A0A6YYK1 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV8-1A0A0A6YYK1 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV8-1A0A0A6YYK1 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV8-1A0A0A6YYK1 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV8-1A0A0A6YYK1 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC18.37■□□□□ 0.53
TRAV8-1A0A0A6YYK1 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV8-1A0A0A6YYK1 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV8-1A0A0A6YYK1 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC18.37■□□□□ 0.53
TRAV8-1A0A0A6YYK1 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV8-1A0A0A6YYK1 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV8-1A0A0A6YYK1 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV8-1A0A0A6YYK1 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV8-1A0A0A6YYK1 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV8-1A0A0A6YYK1 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV8-1A0A0A6YYK1 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
TRAV8-1A0A0A6YYK1 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV8-1A0A0A6YYK1 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC18.36■□□□□ 0.53
TRAV8-1A0A0A6YYK1 AC022211.4-201ENST00000625094 2161 ntBASIC18.36■□□□□ 0.53
TRAV8-1A0A0A6YYK1 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
TRAV8-1A0A0A6YYK1 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV8-1A0A0A6YYK1 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV8-1A0A0A6YYK1 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
TRAV8-1A0A0A6YYK1 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
TRAV8-1A0A0A6YYK1 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV8-1A0A0A6YYK1 AC138932.3-201ENST00000567634 1902 ntBASIC18.35■□□□□ 0.53
TRAV8-1A0A0A6YYK1 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC18.35■□□□□ 0.53
TRAV8-1A0A0A6YYK1 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV8-1A0A0A6YYK1 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
TRAV8-1A0A0A6YYK1 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV8-1A0A0A6YYK1 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV8-1A0A0A6YYK1 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV8-1A0A0A6YYK1 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRAV8-1A0A0A6YYK1 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
TRAV8-1A0A0A6YYK1 AC087741.3-201ENST00000624270 1347 ntBASIC18.33■□□□□ 0.53
TRAV8-1A0A0A6YYK1 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRAV8-1A0A0A6YYK1 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TRAV8-1A0A0A6YYK1 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRAV8-1A0A0A6YYK1 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TRAV8-1A0A0A6YYK1 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRAV8-1A0A0A6YYK1 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
TRAV8-1A0A0A6YYK1 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRAV8-1A0A0A6YYK1 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV8-1A0A0A6YYK1 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV8-1A0A0A6YYK1 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
TRAV8-1A0A0A6YYK1 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV8-1A0A0A6YYK1 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV8-1A0A0A6YYK1 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV8-1A0A0A6YYK1 PREB-202ENST00000406567 1910 ntTSL 5 BASIC18.32■□□□□ 0.52
TRAV8-1A0A0A6YYK1 AP006261.1-201ENST00000584783 668 ntBASIC18.32■□□□□ 0.52
TRAV8-1A0A0A6YYK1 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC18.32■□□□□ 0.52
TRAV8-1A0A0A6YYK1 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC18.32■□□□□ 0.52
TRAV8-1A0A0A6YYK1 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
TRAV8-1A0A0A6YYK1 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV8-1A0A0A6YYK1 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC18.31■□□□□ 0.52
TRAV8-1A0A0A6YYK1 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRAV8-1A0A0A6YYK1 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRAV8-1A0A0A6YYK1 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRAV8-1A0A0A6YYK1 LTK-203ENST00000453182 2412 ntTSL 2 BASIC18.31■□□□□ 0.52
TRAV8-1A0A0A6YYK1 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRAV8-1A0A0A6YYK1 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC18.31■□□□□ 0.52
TRAV8-1A0A0A6YYK1 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
TRAV8-1A0A0A6YYK1 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
TRAV8-1A0A0A6YYK1 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV8-1A0A0A6YYK1 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
TRAV8-1A0A0A6YYK1 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV8-1A0A0A6YYK1 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC18.3■□□□□ 0.52
TRAV8-1A0A0A6YYK1 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV8-1A0A0A6YYK1 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC18.3■□□□□ 0.52
TRAV8-1A0A0A6YYK1 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV8-1A0A0A6YYK1 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC18.3■□□□□ 0.52
TRAV8-1A0A0A6YYK1 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV8-1A0A0A6YYK1 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC18.3■□□□□ 0.52
TRAV8-1A0A0A6YYK1 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
TRAV8-1A0A0A6YYK1 AL139125.2-201ENST00000623134 1869 ntBASIC18.29■□□□□ 0.52
TRAV8-1A0A0A6YYK1 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC18.29■□□□□ 0.52
TRAV8-1A0A0A6YYK1 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV8-1A0A0A6YYK1 RPS2-210ENST00000530225 765 ntTSL 2 BASIC18.29■□□□□ 0.52
TRAV8-1A0A0A6YYK1 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC18.29■□□□□ 0.52
TRAV8-1A0A0A6YYK1 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC18.29■□□□□ 0.52
TRAV8-1A0A0A6YYK1 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV8-1A0A0A6YYK1 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC18.29■□□□□ 0.52
TRAV8-1A0A0A6YYK1 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV8-1A0A0A6YYK1 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV8-1A0A0A6YYK1 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV8-1A0A0A6YYK1 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV8-1A0A0A6YYK1 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
TRAV8-1A0A0A6YYK1 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
TRAV8-1A0A0A6YYK1 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC18.28■□□□□ 0.52
TRAV8-1A0A0A6YYK1 NRG1-221ENST00000614767 762 ntTSL 5 BASIC18.28■□□□□ 0.52
TRAV8-1A0A0A6YYK1 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC18.28■□□□□ 0.52
TRAV8-1A0A0A6YYK1 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
TRAV8-1A0A0A6YYK1 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC18.28■□□□□ 0.52
TRAV8-1A0A0A6YYK1 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV8-1A0A0A6YYK1 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC18.28■□□□□ 0.52
TRAV8-1A0A0A6YYK1 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV8-1A0A0A6YYK1 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC18.27■□□□□ 0.52
TRAV8-1A0A0A6YYK1 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRAV8-1A0A0A6YYK1 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRAV8-1A0A0A6YYK1 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRAV8-1A0A0A6YYK1 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms