Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 AP000867.4-201ENST00000641616 219 ntBASIC17.73■□□□□ 0.43
RAI2Q9Y5P3 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.73■□□□□ 0.43
RAI2Q9Y5P3 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.73■□□□□ 0.43
RAI2Q9Y5P3 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
RAI2Q9Y5P3 LETM1P2-201ENST00000597330 2178 ntBASIC17.73■□□□□ 0.43
RAI2Q9Y5P3 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAI2Q9Y5P3 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAI2Q9Y5P3 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
RAI2Q9Y5P3 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAI2Q9Y5P3 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.72■□□□□ 0.43
RAI2Q9Y5P3 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.72■□□□□ 0.43
RAI2Q9Y5P3 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RAI2Q9Y5P3 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAI2Q9Y5P3 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
RAI2Q9Y5P3 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
RAI2Q9Y5P3 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAI2Q9Y5P3 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RAI2Q9Y5P3 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAI2Q9Y5P3 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAI2Q9Y5P3 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
RAI2Q9Y5P3 PMPCAP1-201ENST00000508114 1576 ntBASIC17.72■□□□□ 0.43
RAI2Q9Y5P3 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.72■□□□□ 0.43
RAI2Q9Y5P3 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.72■□□□□ 0.43
RAI2Q9Y5P3 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.72■□□□□ 0.43
RAI2Q9Y5P3 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
RAI2Q9Y5P3 MYCLP1-201ENST00000372451 1075 ntBASIC17.72■□□□□ 0.43
RAI2Q9Y5P3 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAI2Q9Y5P3 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.72■□□□□ 0.43
RAI2Q9Y5P3 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC17.72■□□□□ 0.43
RAI2Q9Y5P3 HMGN1P19-201ENST00000436976 333 ntBASIC17.72■□□□□ 0.43
RAI2Q9Y5P3 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.72■□□□□ 0.43
RAI2Q9Y5P3 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAI2Q9Y5P3 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.72■□□□□ 0.43
RAI2Q9Y5P3 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAI2Q9Y5P3 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RAI2Q9Y5P3 AC073592.5-201ENST00000624854 528 ntBASIC17.72■□□□□ 0.43
RAI2Q9Y5P3 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.72■□□□□ 0.43
RAI2Q9Y5P3 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAI2Q9Y5P3 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAI2Q9Y5P3 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAI2Q9Y5P3 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
RAI2Q9Y5P3 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.72■□□□□ 0.43
RAI2Q9Y5P3 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAI2Q9Y5P3 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAI2Q9Y5P3 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.72■□□□□ 0.43
RAI2Q9Y5P3 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RAI2Q9Y5P3 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAI2Q9Y5P3 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAI2Q9Y5P3 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.71■□□□□ 0.43
RAI2Q9Y5P3 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
RAI2Q9Y5P3 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAI2Q9Y5P3 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.71■□□□□ 0.43
RAI2Q9Y5P3 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
RAI2Q9Y5P3 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RAI2Q9Y5P3 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
RAI2Q9Y5P3 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RAI2Q9Y5P3 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAI2Q9Y5P3 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAI2Q9Y5P3 PCDHB18P-201ENST00000524813 2368 ntBASIC17.71■□□□□ 0.43
RAI2Q9Y5P3 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RAI2Q9Y5P3 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.71■□□□□ 0.43
RAI2Q9Y5P3 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAI2Q9Y5P3 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC17.71■□□□□ 0.43
RAI2Q9Y5P3 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.71■□□□□ 0.43
RAI2Q9Y5P3 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.71■□□□□ 0.43
RAI2Q9Y5P3 AC092865.5-201ENST00000545435 363 ntBASIC17.71■□□□□ 0.43
RAI2Q9Y5P3 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RAI2Q9Y5P3 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.71■□□□□ 0.43
RAI2Q9Y5P3 STK25P1-201ENST00000585406 838 ntBASIC17.71■□□□□ 0.43
RAI2Q9Y5P3 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAI2Q9Y5P3 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.71■□□□□ 0.43
RAI2Q9Y5P3 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.71■□□□□ 0.43
RAI2Q9Y5P3 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
RAI2Q9Y5P3 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAI2Q9Y5P3 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAI2Q9Y5P3 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAI2Q9Y5P3 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.71■□□□□ 0.43
RAI2Q9Y5P3 AP005117.1-201ENST00000584346 1413 ntBASIC17.71■□□□□ 0.43
RAI2Q9Y5P3 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.71■□□□□ 0.43
RAI2Q9Y5P3 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAI2Q9Y5P3 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
RAI2Q9Y5P3 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.71■□□□□ 0.42
RAI2Q9Y5P3 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAI2Q9Y5P3 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
RAI2Q9Y5P3 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
RAI2Q9Y5P3 AC132938.5-201ENST00000624980 1813 ntBASIC17.7■□□□□ 0.42
RAI2Q9Y5P3 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.7■□□□□ 0.42
RAI2Q9Y5P3 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.7■□□□□ 0.42
RAI2Q9Y5P3 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
RAI2Q9Y5P3 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
RAI2Q9Y5P3 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAI2Q9Y5P3 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.7■□□□□ 0.42
RAI2Q9Y5P3 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAI2Q9Y5P3 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAI2Q9Y5P3 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAI2Q9Y5P3 AKR1C7P-201ENST00000305623 895 ntBASIC17.7■□□□□ 0.42
RAI2Q9Y5P3 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAI2Q9Y5P3 MIR1233-2-201ENST00000408138 82 ntBASIC17.7■□□□□ 0.42
RAI2Q9Y5P3 MIR1233-1-201ENST00000408722 82 ntBASIC17.7■□□□□ 0.42
RAI2Q9Y5P3 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms