Protein–RNA interactions for Protein: Q9Y4K3

TRAF6, TNF receptor-associated factor 6, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF6Q9Y4K3 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.08■□□□□ 0.33
TRAF6Q9Y4K3 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRAF6Q9Y4K3 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
TRAF6Q9Y4K3 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
TRAF6Q9Y4K3 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAF6Q9Y4K3 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAF6Q9Y4K3 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.08■□□□□ 0.32
TRAF6Q9Y4K3 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAF6Q9Y4K3 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAF6Q9Y4K3 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRAF6Q9Y4K3 AL353692.3-201ENST00000407031 1396 ntBASIC17.08■□□□□ 0.32
TRAF6Q9Y4K3 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAF6Q9Y4K3 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17.08■□□□□ 0.32
TRAF6Q9Y4K3 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.08■□□□□ 0.32
TRAF6Q9Y4K3 LIN28AP1-201ENST00000429574 405 ntBASIC17.08■□□□□ 0.32
TRAF6Q9Y4K3 AC068472.1-201ENST00000474589 881 ntBASIC17.08■□□□□ 0.32
TRAF6Q9Y4K3 AP003733.1-201ENST00000491725 852 ntBASIC17.08■□□□□ 0.32
TRAF6Q9Y4K3 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.08■□□□□ 0.32
TRAF6Q9Y4K3 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAF6Q9Y4K3 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAF6Q9Y4K3 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.08■□□□□ 0.32
TRAF6Q9Y4K3 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.08■□□□□ 0.32
TRAF6Q9Y4K3 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.08■□□□□ 0.32
TRAF6Q9Y4K3 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.08■□□□□ 0.32
TRAF6Q9Y4K3 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
TRAF6Q9Y4K3 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRAF6Q9Y4K3 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
TRAF6Q9Y4K3 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAF6Q9Y4K3 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAF6Q9Y4K3 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
TRAF6Q9Y4K3 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAF6Q9Y4K3 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAF6Q9Y4K3 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAF6Q9Y4K3 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAF6Q9Y4K3 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAF6Q9Y4K3 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
TRAF6Q9Y4K3 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.07■□□□□ 0.32
TRAF6Q9Y4K3 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAF6Q9Y4K3 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAF6Q9Y4K3 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAF6Q9Y4K3 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAF6Q9Y4K3 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAF6Q9Y4K3 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAF6Q9Y4K3 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.07■□□□□ 0.32
TRAF6Q9Y4K3 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.07■□□□□ 0.32
TRAF6Q9Y4K3 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAF6Q9Y4K3 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.07■□□□□ 0.32
TRAF6Q9Y4K3 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAF6Q9Y4K3 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRAF6Q9Y4K3 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.07■□□□□ 0.32
TRAF6Q9Y4K3 STARP1-201ENST00000397973 869 ntBASIC17.07■□□□□ 0.32
TRAF6Q9Y4K3 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.07■□□□□ 0.32
TRAF6Q9Y4K3 AC096633.1-201ENST00000422446 749 ntBASIC17.07■□□□□ 0.32
TRAF6Q9Y4K3 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.07■□□□□ 0.32
TRAF6Q9Y4K3 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRAF6Q9Y4K3 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.07■□□□□ 0.32
TRAF6Q9Y4K3 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
TRAF6Q9Y4K3 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC17.07■□□□□ 0.32
TRAF6Q9Y4K3 AC092597.1-201ENST00000487352 616 ntBASIC17.07■□□□□ 0.32
TRAF6Q9Y4K3 AC010203.1-204ENST00000548782 407 ntBASIC17.07■□□□□ 0.32
TRAF6Q9Y4K3 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.07■□□□□ 0.32
TRAF6Q9Y4K3 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRAF6Q9Y4K3 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.07■□□□□ 0.32
TRAF6Q9Y4K3 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAF6Q9Y4K3 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAF6Q9Y4K3 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAF6Q9Y4K3 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAF6Q9Y4K3 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAF6Q9Y4K3 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAF6Q9Y4K3 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAF6Q9Y4K3 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.07■□□□□ 0.32
TRAF6Q9Y4K3 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.07■□□□□ 0.32
TRAF6Q9Y4K3 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.06■□□□□ 0.32
TRAF6Q9Y4K3 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.06■□□□□ 0.32
TRAF6Q9Y4K3 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.06■□□□□ 0.32
TRAF6Q9Y4K3 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAF6Q9Y4K3 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAF6Q9Y4K3 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAF6Q9Y4K3 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRAF6Q9Y4K3 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRAF6Q9Y4K3 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAF6Q9Y4K3 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRAF6Q9Y4K3 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.06■□□□□ 0.32
TRAF6Q9Y4K3 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.06■□□□□ 0.32
TRAF6Q9Y4K3 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.06■□□□□ 0.32
TRAF6Q9Y4K3 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
TRAF6Q9Y4K3 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAF6Q9Y4K3 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAF6Q9Y4K3 MIR662-201ENST00000384847 95 ntBASIC17.06■□□□□ 0.32
TRAF6Q9Y4K3 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.06■□□□□ 0.32
TRAF6Q9Y4K3 ATP5G1P1-201ENST00000448724 379 ntBASIC17.06■□□□□ 0.32
TRAF6Q9Y4K3 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.06■□□□□ 0.32
TRAF6Q9Y4K3 ZNF444P1-201ENST00000559497 298 ntBASIC17.06■□□□□ 0.32
TRAF6Q9Y4K3 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.06■□□□□ 0.32
TRAF6Q9Y4K3 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.06■□□□□ 0.32
TRAF6Q9Y4K3 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.06■□□□□ 0.32
TRAF6Q9Y4K3 AC011558.1-201ENST00000623459 338 ntBASIC17.06■□□□□ 0.32
TRAF6Q9Y4K3 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.06■□□□□ 0.32
TRAF6Q9Y4K3 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.06■□□□□ 0.32
TRAF6Q9Y4K3 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms