Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PKP3Q9Y446 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PKP3Q9Y446 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PKP3Q9Y446 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PKP3Q9Y446 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
PKP3Q9Y446 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PKP3Q9Y446 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PKP3Q9Y446 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.62■□□□□ 0.41
PKP3Q9Y446 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.61■□□□□ 0.41
PKP3Q9Y446 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
PKP3Q9Y446 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
PKP3Q9Y446 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
PKP3Q9Y446 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PKP3Q9Y446 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PKP3Q9Y446 RCN1P2-201ENST00000398357 915 ntBASIC17.61■□□□□ 0.41
PKP3Q9Y446 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.61■□□□□ 0.41
PKP3Q9Y446 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.61■□□□□ 0.41
PKP3Q9Y446 NUS1P1-201ENST00000446295 882 ntBASIC17.61■□□□□ 0.41
PKP3Q9Y446 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.61■□□□□ 0.41
PKP3Q9Y446 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.61■□□□□ 0.41
PKP3Q9Y446 AC109462.3-201ENST00000573934 613 ntBASIC17.61■□□□□ 0.41
PKP3Q9Y446 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.61■□□□□ 0.41
PKP3Q9Y446 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.61■□□□□ 0.41
PKP3Q9Y446 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.61■□□□□ 0.41
PKP3Q9Y446 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PKP3Q9Y446 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PKP3Q9Y446 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.61■□□□□ 0.41
PKP3Q9Y446 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
PKP3Q9Y446 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PKP3Q9Y446 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
PKP3Q9Y446 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PKP3Q9Y446 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PKP3Q9Y446 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
PKP3Q9Y446 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PKP3Q9Y446 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PKP3Q9Y446 INTS4P1-201ENST00000438455 1935 ntBASIC17.6■□□□□ 0.41
PKP3Q9Y446 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PKP3Q9Y446 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PKP3Q9Y446 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PKP3Q9Y446 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.6■□□□□ 0.41
PKP3Q9Y446 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PKP3Q9Y446 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PKP3Q9Y446 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PKP3Q9Y446 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PKP3Q9Y446 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PKP3Q9Y446 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PKP3Q9Y446 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
PKP3Q9Y446 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PKP3Q9Y446 KRT16P4-201ENST00000453883 522 ntBASIC17.6■□□□□ 0.41
PKP3Q9Y446 FOSL1P1-201ENST00000511041 816 ntBASIC17.6■□□□□ 0.41
PKP3Q9Y446 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.6■□□□□ 0.41
PKP3Q9Y446 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PKP3Q9Y446 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.6■□□□□ 0.41
PKP3Q9Y446 PRELID1P1-202ENST00000567272 903 ntBASIC17.6■□□□□ 0.41
PKP3Q9Y446 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.6■□□□□ 0.41
PKP3Q9Y446 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.6■□□□□ 0.41
PKP3Q9Y446 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PKP3Q9Y446 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.6■□□□□ 0.41
PKP3Q9Y446 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.6■□□□□ 0.41
PKP3Q9Y446 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PKP3Q9Y446 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PKP3Q9Y446 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PKP3Q9Y446 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PKP3Q9Y446 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.6■□□□□ 0.41
PKP3Q9Y446 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
PKP3Q9Y446 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PKP3Q9Y446 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PKP3Q9Y446 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.6■□□□□ 0.41
PKP3Q9Y446 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
PKP3Q9Y446 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PKP3Q9Y446 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
PKP3Q9Y446 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PKP3Q9Y446 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
PKP3Q9Y446 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PKP3Q9Y446 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PKP3Q9Y446 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
PKP3Q9Y446 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PKP3Q9Y446 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.59■□□□□ 0.41
PKP3Q9Y446 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
PKP3Q9Y446 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.59■□□□□ 0.41
PKP3Q9Y446 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PKP3Q9Y446 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.59■□□□□ 0.41
PKP3Q9Y446 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.59■□□□□ 0.41
PKP3Q9Y446 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PKP3Q9Y446 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.59■□□□□ 0.41
PKP3Q9Y446 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.59■□□□□ 0.41
PKP3Q9Y446 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.59■□□□□ 0.41
PKP3Q9Y446 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.59■□□□□ 0.41
PKP3Q9Y446 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PKP3Q9Y446 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PKP3Q9Y446 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.59■□□□□ 0.41
PKP3Q9Y446 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
PKP3Q9Y446 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
PKP3Q9Y446 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC17.59■□□□□ 0.41
PKP3Q9Y446 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.59■□□□□ 0.41
PKP3Q9Y446 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.59■□□□□ 0.41
PKP3Q9Y446 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.59■□□□□ 0.41
PKP3Q9Y446 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
PKP3Q9Y446 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PKP3Q9Y446 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms