Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.12■□□□□ 0.17
RPH3AQ9Y2J0 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RPH3AQ9Y2J0 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RPH3AQ9Y2J0 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.12■□□□□ 0.17
RPH3AQ9Y2J0 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.12■□□□□ 0.17
RPH3AQ9Y2J0 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RPH3AQ9Y2J0 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RPH3AQ9Y2J0 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RPH3AQ9Y2J0 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
RPH3AQ9Y2J0 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.12■□□□□ 0.17
RPH3AQ9Y2J0 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RPH3AQ9Y2J0 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
RPH3AQ9Y2J0 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RPH3AQ9Y2J0 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.11■□□□□ 0.17
RPH3AQ9Y2J0 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RPH3AQ9Y2J0 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RPH3AQ9Y2J0 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.11■□□□□ 0.17
RPH3AQ9Y2J0 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.11■□□□□ 0.17
RPH3AQ9Y2J0 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RPH3AQ9Y2J0 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RPH3AQ9Y2J0 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RPH3AQ9Y2J0 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.11■□□□□ 0.17
RPH3AQ9Y2J0 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
RPH3AQ9Y2J0 AC007967.3-201ENST00000434308 558 ntBASIC16.11■□□□□ 0.17
RPH3AQ9Y2J0 KRT16P4-201ENST00000453883 522 ntBASIC16.11■□□□□ 0.17
RPH3AQ9Y2J0 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC16.11■□□□□ 0.17
RPH3AQ9Y2J0 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.11■□□□□ 0.17
RPH3AQ9Y2J0 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.11■□□□□ 0.17
RPH3AQ9Y2J0 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RPH3AQ9Y2J0 MIR5100-201ENST00000579544 119 ntBASIC16.11■□□□□ 0.17
RPH3AQ9Y2J0 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
RPH3AQ9Y2J0 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RPH3AQ9Y2J0 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
RPH3AQ9Y2J0 AC010460.3-201ENST00000511359 1579 ntBASIC16.11■□□□□ 0.17
RPH3AQ9Y2J0 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.11■□□□□ 0.17
RPH3AQ9Y2J0 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.11■□□□□ 0.17
RPH3AQ9Y2J0 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.11■□□□□ 0.17
RPH3AQ9Y2J0 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RPH3AQ9Y2J0 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.11■□□□□ 0.17
RPH3AQ9Y2J0 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RPH3AQ9Y2J0 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RPH3AQ9Y2J0 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RPH3AQ9Y2J0 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
RPH3AQ9Y2J0 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.1■□□□□ 0.17
RPH3AQ9Y2J0 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
RPH3AQ9Y2J0 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RPH3AQ9Y2J0 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
RPH3AQ9Y2J0 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RPH3AQ9Y2J0 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.1■□□□□ 0.17
RPH3AQ9Y2J0 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RPH3AQ9Y2J0 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RPH3AQ9Y2J0 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RPH3AQ9Y2J0 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
RPH3AQ9Y2J0 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.1■□□□□ 0.17
RPH3AQ9Y2J0 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.1■□□□□ 0.17
RPH3AQ9Y2J0 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RPH3AQ9Y2J0 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.1■□□□□ 0.17
RPH3AQ9Y2J0 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.1■□□□□ 0.17
RPH3AQ9Y2J0 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.1■□□□□ 0.17
RPH3AQ9Y2J0 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.1■□□□□ 0.17
RPH3AQ9Y2J0 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.1■□□□□ 0.17
RPH3AQ9Y2J0 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.1■□□□□ 0.17
RPH3AQ9Y2J0 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.1■□□□□ 0.17
RPH3AQ9Y2J0 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RPH3AQ9Y2J0 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RPH3AQ9Y2J0 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
RPH3AQ9Y2J0 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RPH3AQ9Y2J0 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
RPH3AQ9Y2J0 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
RPH3AQ9Y2J0 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RPH3AQ9Y2J0 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.1■□□□□ 0.17
RPH3AQ9Y2J0 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
RPH3AQ9Y2J0 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
RPH3AQ9Y2J0 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RPH3AQ9Y2J0 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
RPH3AQ9Y2J0 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RPH3AQ9Y2J0 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.09■□□□□ 0.17
RPH3AQ9Y2J0 AC012313.1-201ENST00000593393 3059 ntBASIC16.09■□□□□ 0.17
RPH3AQ9Y2J0 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RPH3AQ9Y2J0 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RPH3AQ9Y2J0 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RPH3AQ9Y2J0 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RPH3AQ9Y2J0 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
RPH3AQ9Y2J0 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RPH3AQ9Y2J0 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.09■□□□□ 0.17
RPH3AQ9Y2J0 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC16.09■□□□□ 0.17
RPH3AQ9Y2J0 AC104692.2-201ENST00000603054 253 ntBASIC16.09■□□□□ 0.17
RPH3AQ9Y2J0 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
RPH3AQ9Y2J0 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RPH3AQ9Y2J0 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.09■□□□□ 0.17
RPH3AQ9Y2J0 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
RPH3AQ9Y2J0 GNAS-203ENST00000306120 1878 ntBASIC16.09■□□□□ 0.17
RPH3AQ9Y2J0 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
RPH3AQ9Y2J0 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RPH3AQ9Y2J0 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RPH3AQ9Y2J0 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RPH3AQ9Y2J0 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RPH3AQ9Y2J0 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RPH3AQ9Y2J0 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.09■□□□□ 0.17
RPH3AQ9Y2J0 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms