Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 INIP-202ENST00000374236 874 ntTSL 2 BASIC16.49■□□□□ 0.23
CTSFQ9UBX1 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.49■□□□□ 0.23
CTSFQ9UBX1 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
CTSFQ9UBX1 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CTSFQ9UBX1 AC098831.1-202ENST00000438821 336 ntBASIC16.49■□□□□ 0.23
CTSFQ9UBX1 RPL13AP23-201ENST00000480739 586 ntBASIC16.49■□□□□ 0.23
CTSFQ9UBX1 AC002558.1-201ENST00000488906 803 ntBASIC16.49■□□□□ 0.23
CTSFQ9UBX1 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CTSFQ9UBX1 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CTSFQ9UBX1 RPL18-209ENST00000550645 463 ntTSL 5 BASIC16.49■□□□□ 0.23
CTSFQ9UBX1 RPL18-214ENST00000552588 559 ntTSL 3 BASIC16.49■□□□□ 0.23
CTSFQ9UBX1 AC105339.3-201ENST00000560043 636 ntBASIC16.49■□□□□ 0.23
CTSFQ9UBX1 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.49■□□□□ 0.23
CTSFQ9UBX1 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC16.49■□□□□ 0.23
CTSFQ9UBX1 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.49■□□□□ 0.23
CTSFQ9UBX1 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CTSFQ9UBX1 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CTSFQ9UBX1 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CTSFQ9UBX1 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CTSFQ9UBX1 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CTSFQ9UBX1 REXO1L11P-201ENST00000620964 1927 ntBASIC16.49■□□□□ 0.23
CTSFQ9UBX1 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
CTSFQ9UBX1 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.48■□□□□ 0.23
CTSFQ9UBX1 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
CTSFQ9UBX1 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CTSFQ9UBX1 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CTSFQ9UBX1 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.48■□□□□ 0.23
CTSFQ9UBX1 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.48■□□□□ 0.23
CTSFQ9UBX1 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CTSFQ9UBX1 AL133373.2-201ENST00000623187 2828 ntBASIC16.48■□□□□ 0.23
CTSFQ9UBX1 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
CTSFQ9UBX1 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
CTSFQ9UBX1 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CTSFQ9UBX1 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.48■□□□□ 0.23
CTSFQ9UBX1 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CTSFQ9UBX1 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CTSFQ9UBX1 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CTSFQ9UBX1 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CTSFQ9UBX1 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.48■□□□□ 0.23
CTSFQ9UBX1 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC16.48■□□□□ 0.23
CTSFQ9UBX1 PRYP5-201ENST00000451909 266 ntBASIC16.48■□□□□ 0.23
CTSFQ9UBX1 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.48■□□□□ 0.23
CTSFQ9UBX1 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC16.48■□□□□ 0.23
CTSFQ9UBX1 IGHV3-22-201ENST00000520721 359 ntBASIC16.48■□□□□ 0.23
CTSFQ9UBX1 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CTSFQ9UBX1 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.48■□□□□ 0.23
CTSFQ9UBX1 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.48■□□□□ 0.23
CTSFQ9UBX1 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.48■□□□□ 0.23
CTSFQ9UBX1 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC16.48■□□□□ 0.23
CTSFQ9UBX1 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.48■□□□□ 0.23
CTSFQ9UBX1 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
CTSFQ9UBX1 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CTSFQ9UBX1 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CTSFQ9UBX1 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CTSFQ9UBX1 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CTSFQ9UBX1 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.48■□□□□ 0.23
CTSFQ9UBX1 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CTSFQ9UBX1 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.48■□□□□ 0.23
CTSFQ9UBX1 AC012317.2-201ENST00000623305 2251 ntBASIC16.48■□□□□ 0.23
CTSFQ9UBX1 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CTSFQ9UBX1 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.48■□□□□ 0.23
CTSFQ9UBX1 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.48■□□□□ 0.23
CTSFQ9UBX1 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CTSFQ9UBX1 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CTSFQ9UBX1 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CTSFQ9UBX1 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CTSFQ9UBX1 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CTSFQ9UBX1 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.47■□□□□ 0.23
CTSFQ9UBX1 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CTSFQ9UBX1 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CTSFQ9UBX1 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CTSFQ9UBX1 AC104109.2-201ENST00000602919 1418 ntBASIC16.47■□□□□ 0.23
CTSFQ9UBX1 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CTSFQ9UBX1 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CTSFQ9UBX1 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
CTSFQ9UBX1 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.47■□□□□ 0.23
CTSFQ9UBX1 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16.47■□□□□ 0.23
CTSFQ9UBX1 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.47■□□□□ 0.23
CTSFQ9UBX1 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC16.47■□□□□ 0.23
CTSFQ9UBX1 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.47■□□□□ 0.23
CTSFQ9UBX1 STK19B-204ENST00000512515 211 ntBASIC16.47■□□□□ 0.23
CTSFQ9UBX1 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC16.47■□□□□ 0.23
CTSFQ9UBX1 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.47■□□□□ 0.23
CTSFQ9UBX1 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.47■□□□□ 0.23
CTSFQ9UBX1 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CTSFQ9UBX1 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.47■□□□□ 0.23
CTSFQ9UBX1 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CTSFQ9UBX1 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CTSFQ9UBX1 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CTSFQ9UBX1 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.47■□□□□ 0.23
CTSFQ9UBX1 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.47■□□□□ 0.23
CTSFQ9UBX1 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CTSFQ9UBX1 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
CTSFQ9UBX1 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
CTSFQ9UBX1 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC16.46■□□□□ 0.23
CTSFQ9UBX1 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CTSFQ9UBX1 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CTSFQ9UBX1 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CTSFQ9UBX1 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CTSFQ9UBX1 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms