Protein–RNA interactions for Protein: Q9NZR4

VSX1, Visual system homeobox 1, humanhuman

Predicted RBP Predictions only

Length 365 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1Q9NZR4 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
VSX1Q9NZR4 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VSX1Q9NZR4 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
VSX1Q9NZR4 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
VSX1Q9NZR4 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
VSX1Q9NZR4 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
VSX1Q9NZR4 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
VSX1Q9NZR4 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC15.67■□□□□ 0.1
VSX1Q9NZR4 TSPY22P-201ENST00000427496 604 ntBASIC15.67■□□□□ 0.1
VSX1Q9NZR4 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
VSX1Q9NZR4 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC15.67■□□□□ 0.1
VSX1Q9NZR4 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC15.67■□□□□ 0.1
VSX1Q9NZR4 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC15.67■□□□□ 0.1
VSX1Q9NZR4 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC15.67■□□□□ 0.1
VSX1Q9NZR4 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
VSX1Q9NZR4 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
VSX1Q9NZR4 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC15.67■□□□□ 0.1
VSX1Q9NZR4 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC15.67■□□□□ 0.1
VSX1Q9NZR4 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
VSX1Q9NZR4 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
VSX1Q9NZR4 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VSX1Q9NZR4 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
VSX1Q9NZR4 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
VSX1Q9NZR4 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
VSX1Q9NZR4 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
VSX1Q9NZR4 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
VSX1Q9NZR4 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VSX1Q9NZR4 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
VSX1Q9NZR4 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
VSX1Q9NZR4 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
VSX1Q9NZR4 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC15.66■□□□□ 0.1
VSX1Q9NZR4 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC15.66■□□□□ 0.1
VSX1Q9NZR4 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
VSX1Q9NZR4 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
VSX1Q9NZR4 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VSX1Q9NZR4 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
VSX1Q9NZR4 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VSX1Q9NZR4 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VSX1Q9NZR4 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VSX1Q9NZR4 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VSX1Q9NZR4 PON3-205ENST00000451904 1053 ntTSL 3 BASIC15.66■□□□□ 0.1
VSX1Q9NZR4 AL136038.3-201ENST00000561909 1096 ntBASIC15.66■□□□□ 0.1
VSX1Q9NZR4 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC15.66■□□□□ 0.1
VSX1Q9NZR4 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC15.66■□□□□ 0.1
VSX1Q9NZR4 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
VSX1Q9NZR4 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC15.66■□□□□ 0.1
VSX1Q9NZR4 VPS72-207ENST00000640458 689 ntTSL 5 BASIC15.66■□□□□ 0.1
VSX1Q9NZR4 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC15.66■□□□□ 0.1
VSX1Q9NZR4 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VSX1Q9NZR4 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
VSX1Q9NZR4 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
VSX1Q9NZR4 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
VSX1Q9NZR4 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC15.66■□□□□ 0.1
VSX1Q9NZR4 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
VSX1Q9NZR4 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VSX1Q9NZR4 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC15.66■□□□□ 0.1
VSX1Q9NZR4 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VSX1Q9NZR4 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VSX1Q9NZR4 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
VSX1Q9NZR4 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VSX1Q9NZR4 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC15.65■□□□□ 0.1
VSX1Q9NZR4 AL139384.1-201ENST00000612143 3047 ntBASIC15.65■□□□□ 0.1
VSX1Q9NZR4 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
VSX1Q9NZR4 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC15.65■□□□□ 0.1
VSX1Q9NZR4 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC15.65■□□□□ 0.1
VSX1Q9NZR4 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
VSX1Q9NZR4 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC15.65■□□□□ 0.1
VSX1Q9NZR4 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
VSX1Q9NZR4 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC15.65■□□□□ 0.1
VSX1Q9NZR4 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VSX1Q9NZR4 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
VSX1Q9NZR4 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
VSX1Q9NZR4 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC15.65■□□□□ 0.1
VSX1Q9NZR4 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
VSX1Q9NZR4 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
VSX1Q9NZR4 TMPOP1-202ENST00000424642 1267 ntBASIC15.65■□□□□ 0.1
VSX1Q9NZR4 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC15.65■□□□□ 0.1
VSX1Q9NZR4 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
VSX1Q9NZR4 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC15.65■□□□□ 0.1
VSX1Q9NZR4 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
VSX1Q9NZR4 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
VSX1Q9NZR4 AC011498.5-201ENST00000592027 486 ntBASIC15.65■□□□□ 0.1
VSX1Q9NZR4 AL592071.1-201ENST00000611956 408 ntBASIC15.65■□□□□ 0.1
VSX1Q9NZR4 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
VSX1Q9NZR4 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
VSX1Q9NZR4 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
VSX1Q9NZR4 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
VSX1Q9NZR4 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VSX1Q9NZR4 AC125634.1-201ENST00000438758 1403 ntBASIC15.65■□□□□ 0.1
VSX1Q9NZR4 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
VSX1Q9NZR4 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC15.65■□□□□ 0.1
VSX1Q9NZR4 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
VSX1Q9NZR4 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
VSX1Q9NZR4 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC15.65■□□□□ 0.1
VSX1Q9NZR4 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.65■□□□□ 0.1
VSX1Q9NZR4 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VSX1Q9NZR4 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
VSX1Q9NZR4 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VSX1Q9NZR4 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VSX1Q9NZR4 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms