Protein–RNA interactions for Protein: Q9NWW0

HCFC1R1, Host cell factor C1 regulator 1, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1Q9NWW0 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HCFC1R1Q9NWW0 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HCFC1R1Q9NWW0 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.09■□□□□ 0.49
HCFC1R1Q9NWW0 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
HCFC1R1Q9NWW0 AC046185.3-201ENST00000623228 1824 ntBASIC18.09■□□□□ 0.49
HCFC1R1Q9NWW0 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HCFC1R1Q9NWW0 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.09■□□□□ 0.49
HCFC1R1Q9NWW0 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
HCFC1R1Q9NWW0 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.08■□□□□ 0.49
HCFC1R1Q9NWW0 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
HCFC1R1Q9NWW0 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
HCFC1R1Q9NWW0 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
HCFC1R1Q9NWW0 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HCFC1R1Q9NWW0 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
HCFC1R1Q9NWW0 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
HCFC1R1Q9NWW0 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.08■□□□□ 0.48
HCFC1R1Q9NWW0 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.08■□□□□ 0.48
HCFC1R1Q9NWW0 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HCFC1R1Q9NWW0 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC18.08■□□□□ 0.48
HCFC1R1Q9NWW0 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
HCFC1R1Q9NWW0 AL645939.2-201ENST00000427340 991 ntBASIC18.08■□□□□ 0.48
HCFC1R1Q9NWW0 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC18.08■□□□□ 0.48
HCFC1R1Q9NWW0 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC18.08■□□□□ 0.48
HCFC1R1Q9NWW0 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
HCFC1R1Q9NWW0 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
HCFC1R1Q9NWW0 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC18.08■□□□□ 0.48
HCFC1R1Q9NWW0 AC092902.6-201ENST00000641783 218 ntBASIC18.08■□□□□ 0.48
HCFC1R1Q9NWW0 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
HCFC1R1Q9NWW0 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
HCFC1R1Q9NWW0 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC18.08■□□□□ 0.48
HCFC1R1Q9NWW0 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HCFC1R1Q9NWW0 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HCFC1R1Q9NWW0 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
HCFC1R1Q9NWW0 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.08■□□□□ 0.48
HCFC1R1Q9NWW0 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HCFC1R1Q9NWW0 AC092919.2-201ENST00000623631 1645 ntBASIC18.08■□□□□ 0.48
HCFC1R1Q9NWW0 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
HCFC1R1Q9NWW0 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HCFC1R1Q9NWW0 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HCFC1R1Q9NWW0 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
HCFC1R1Q9NWW0 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.07■□□□□ 0.48
HCFC1R1Q9NWW0 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HCFC1R1Q9NWW0 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
HCFC1R1Q9NWW0 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.07■□□□□ 0.48
HCFC1R1Q9NWW0 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
HCFC1R1Q9NWW0 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HCFC1R1Q9NWW0 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HCFC1R1Q9NWW0 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.07■□□□□ 0.48
HCFC1R1Q9NWW0 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC18.07■□□□□ 0.48
HCFC1R1Q9NWW0 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.07■□□□□ 0.48
HCFC1R1Q9NWW0 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
HCFC1R1Q9NWW0 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
HCFC1R1Q9NWW0 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HCFC1R1Q9NWW0 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
HCFC1R1Q9NWW0 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC18.07■□□□□ 0.48
HCFC1R1Q9NWW0 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HCFC1R1Q9NWW0 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
HCFC1R1Q9NWW0 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
HCFC1R1Q9NWW0 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC18.07■□□□□ 0.48
HCFC1R1Q9NWW0 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
HCFC1R1Q9NWW0 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HCFC1R1Q9NWW0 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC18.07■□□□□ 0.48
HCFC1R1Q9NWW0 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC18.07■□□□□ 0.48
HCFC1R1Q9NWW0 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
HCFC1R1Q9NWW0 AC093028.1-201ENST00000622998 982 ntBASIC18.07■□□□□ 0.48
HCFC1R1Q9NWW0 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HCFC1R1Q9NWW0 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HCFC1R1Q9NWW0 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
HCFC1R1Q9NWW0 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HCFC1R1Q9NWW0 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
HCFC1R1Q9NWW0 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
HCFC1R1Q9NWW0 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.07■□□□□ 0.48
HCFC1R1Q9NWW0 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HCFC1R1Q9NWW0 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HCFC1R1Q9NWW0 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HCFC1R1Q9NWW0 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HCFC1R1Q9NWW0 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HCFC1R1Q9NWW0 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.06■□□□□ 0.48
HCFC1R1Q9NWW0 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HCFC1R1Q9NWW0 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HCFC1R1Q9NWW0 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.06■□□□□ 0.48
HCFC1R1Q9NWW0 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.06■□□□□ 0.48
HCFC1R1Q9NWW0 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC18.06■□□□□ 0.48
HCFC1R1Q9NWW0 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HCFC1R1Q9NWW0 REM2-202ENST00000536884 1331 ntTSL 2 BASIC18.06■□□□□ 0.48
HCFC1R1Q9NWW0 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HCFC1R1Q9NWW0 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HCFC1R1Q9NWW0 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HCFC1R1Q9NWW0 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HCFC1R1Q9NWW0 AL139400.1-201ENST00000366220 510 ntBASIC18.06■□□□□ 0.48
HCFC1R1Q9NWW0 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC18.06■□□□□ 0.48
HCFC1R1Q9NWW0 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC18.06■□□□□ 0.48
HCFC1R1Q9NWW0 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC18.06■□□□□ 0.48
HCFC1R1Q9NWW0 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.06■□□□□ 0.48
HCFC1R1Q9NWW0 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC18.06■□□□□ 0.48
HCFC1R1Q9NWW0 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC18.06■□□□□ 0.48
HCFC1R1Q9NWW0 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC18.06■□□□□ 0.48
HCFC1R1Q9NWW0 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
HCFC1R1Q9NWW0 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC18.06■□□□□ 0.48
HCFC1R1Q9NWW0 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms