Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
ECHDC1Q9NTX5 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
ECHDC1Q9NTX5 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
ECHDC1Q9NTX5 HTR7P1-202ENST00000624664 4411 ntBASIC21.33■■□□□ 1
ECHDC1Q9NTX5 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
ECHDC1Q9NTX5 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC21.33■■□□□ 1
ECHDC1Q9NTX5 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC21.33■■□□□ 1
ECHDC1Q9NTX5 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC21.32■■□□□ 1
ECHDC1Q9NTX5 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC21.32■■□□□ 1
ECHDC1Q9NTX5 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ECHDC1Q9NTX5 AC016396.2-201ENST00000562575 1417 ntBASIC21.32■■□□□ 1
ECHDC1Q9NTX5 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC21.32■■□□□ 1
ECHDC1Q9NTX5 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
ECHDC1Q9NTX5 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC21.32■■□□□ 1
ECHDC1Q9NTX5 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC21.32■■□□□ 1
ECHDC1Q9NTX5 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC21.32■■□□□ 1
ECHDC1Q9NTX5 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC21.32■■□□□ 1
ECHDC1Q9NTX5 AL450487.1-201ENST00000426799 995 ntBASIC21.32■■□□□ 1
ECHDC1Q9NTX5 FGFR3P6-201ENST00000457012 610 ntBASIC21.32■■□□□ 1
ECHDC1Q9NTX5 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC21.32■■□□□ 1
ECHDC1Q9NTX5 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
ECHDC1Q9NTX5 KRT126P-201ENST00000549467 1181 ntBASIC21.32■■□□□ 1
ECHDC1Q9NTX5 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC21.32■■□□□ 1
ECHDC1Q9NTX5 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC21.32■■□□□ 1
ECHDC1Q9NTX5 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC21.32■■□□□ 1
ECHDC1Q9NTX5 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
ECHDC1Q9NTX5 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ECHDC1Q9NTX5 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC21.32■■□□□ 1
ECHDC1Q9NTX5 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
ECHDC1Q9NTX5 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ECHDC1Q9NTX5 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
ECHDC1Q9NTX5 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
ECHDC1Q9NTX5 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ECHDC1Q9NTX5 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC21.31■■□□□ 1
ECHDC1Q9NTX5 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
ECHDC1Q9NTX5 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC21.31■■□□□ 1
ECHDC1Q9NTX5 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC21.31■■□□□ 1
ECHDC1Q9NTX5 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ECHDC1Q9NTX5 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ECHDC1Q9NTX5 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC21.31■■□□□ 1
ECHDC1Q9NTX5 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC21.31■■□□□ 1
ECHDC1Q9NTX5 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC21.31■■□□□ 1
ECHDC1Q9NTX5 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC21.31■■□□□ 1
ECHDC1Q9NTX5 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC21.31■■□□□ 1
ECHDC1Q9NTX5 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC21.31■■□□□ 1
ECHDC1Q9NTX5 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ECHDC1Q9NTX5 AC008608.2-201ENST00000606089 416 ntBASIC21.31■■□□□ 1
ECHDC1Q9NTX5 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ECHDC1Q9NTX5 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC21.31■■□□□ 1
ECHDC1Q9NTX5 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
ECHDC1Q9NTX5 AL645608.8-201ENST00000606034 2086 ntBASIC21.31■■□□□ 1
ECHDC1Q9NTX5 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
ECHDC1Q9NTX5 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC21.31■■□□□ 1
ECHDC1Q9NTX5 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ECHDC1Q9NTX5 EML3-212ENST00000494176 2901 ntTSL 2 BASIC21.31■■□□□ 1
ECHDC1Q9NTX5 EML3-216ENST00000529309 2909 ntTSL 2 BASIC21.31■■□□□ 1
ECHDC1Q9NTX5 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC21.31■■□□□ 1
ECHDC1Q9NTX5 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC21.31■■□□□ 1
ECHDC1Q9NTX5 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC21.31■■□□□ 1
ECHDC1Q9NTX5 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC21.31■■□□□ 1
ECHDC1Q9NTX5 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC21.31■■□□□ 1
ECHDC1Q9NTX5 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
ECHDC1Q9NTX5 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC21.3■■□□□ 1
ECHDC1Q9NTX5 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
ECHDC1Q9NTX5 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC21.3■■□□□ 1
ECHDC1Q9NTX5 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
ECHDC1Q9NTX5 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ECHDC1Q9NTX5 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
ECHDC1Q9NTX5 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
ECHDC1Q9NTX5 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ECHDC1Q9NTX5 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ECHDC1Q9NTX5 EMBP1-201ENST00000458200 901 ntBASIC21.3■■□□□ 1
ECHDC1Q9NTX5 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC21.3■■□□□ 1
ECHDC1Q9NTX5 BMF-207ENST00000559701 630 ntTSL 3 BASIC21.3■■□□□ 1
ECHDC1Q9NTX5 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC21.3■■□□□ 1
ECHDC1Q9NTX5 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC21.3■■□□□ 1
ECHDC1Q9NTX5 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC21.3■■□□□ 1
ECHDC1Q9NTX5 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC21.3■■□□□ 1
ECHDC1Q9NTX5 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ECHDC1Q9NTX5 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC21.29■■□□□ 1
ECHDC1Q9NTX5 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ECHDC1Q9NTX5 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC21.29■■□□□ 1
ECHDC1Q9NTX5 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC21.29■■□□□ 1
ECHDC1Q9NTX5 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ECHDC1Q9NTX5 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC21.29■■□□□ 1
ECHDC1Q9NTX5 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
ECHDC1Q9NTX5 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
ECHDC1Q9NTX5 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC21.29■■□□□ 1
ECHDC1Q9NTX5 FZD10-202ENST00000539839 3282 ntBASIC21.29■■□□□ 1
ECHDC1Q9NTX5 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC21.29■■□□□ 1
ECHDC1Q9NTX5 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ECHDC1Q9NTX5 AL135999.2-201ENST00000622438 1686 ntBASIC21.29■■□□□ 1
ECHDC1Q9NTX5 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC21.29■■□□□ 1
ECHDC1Q9NTX5 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
ECHDC1Q9NTX5 PAN3-AS1-201ENST00000563843 1351 ntBASIC21.29■■□□□ 1
ECHDC1Q9NTX5 SIGLEC30P-201ENST00000455569 941 ntBASIC21.29■■□□□ 1
ECHDC1Q9NTX5 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC21.29■■□□□ 1
ECHDC1Q9NTX5 IRF5-214ENST00000613821 595 ntTSL 5 BASIC21.29■■□□□ 1
ECHDC1Q9NTX5 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ECHDC1Q9NTX5 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms