Protein–RNA interactions for Protein: Q9NRR4

DROSHA, Ribonuclease 3, humanhuman

Known RBP eCLIP

Length 1,374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DROSHAQ9NRR4 NFATC3-204ENST00000379165 3583 ntTSL 213.54□□□□□ -0.243e-6■□□□□ 10.3
DROSHAQ9NRR4 NFATC3-213ENST00000563319 4122 ntTSL 1 (best)13.5□□□□□ -0.253e-6■□□□□ 10.3
DROSHAQ9NRR4 NFATC3-208ENST00000553077 3870 ntTSL 212.68□□□□□ -0.383e-6■□□□□ 10.3
DROSHAQ9NRR4 NFATC3-220ENST00000569766 3555 ntTSL 1 (best)11.41□□□□□ -0.583e-6■□□□□ 10.3
DROSHAQ9NRR4 NFATC3-207ENST00000549350 3588 ntTSL 210.94□□□□□ -0.663e-6■□□□□ 10.3
DROSHAQ9NRR4 NFATC3-221ENST00000570212 3181 ntTSL 1 (best)9.33□□□□□ -0.923e-6■□□□□ 10.3
DROSHAQ9NRR4 NFATC3-212ENST00000563288 3790 ntTSL 1 (best)9.17□□□□□ -0.943e-6■□□□□ 10.3
DROSHAQ9NRR4 NFATC3-211ENST00000562926 3748 ntTSL 1 (best)8.98□□□□□ -0.973e-6■□□□□ 10.3
DROSHAQ9NRR4 NFATC3-216ENST00000566301 3840 ntTSL 1 (best)8.69□□□□□ -1.023e-6■□□□□ 10.3
DROSHAQ9NRR4 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.043e-6■□□□□ 10.3
DROSHAQ9NRR4 NFATC3-205ENST00000535127 4194 ntTSL 1 (best)8.51□□□□□ -1.053e-6■□□□□ 10.3
DROSHAQ9NRR4 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC7.78□□□□□ -1.163e-6■□□□□ 10.3
DROSHAQ9NRR4 NFATC3-214ENST00000563796 3753 ntTSL 1 (best)7.6□□□□□ -1.193e-6■□□□□ 10.3
DROSHAQ9NRR4 NFATC3-218ENST00000567152 3186 ntTSL 1 (best)7.44□□□□□ -1.223e-6■□□□□ 10.3
DROSHAQ9NRR4 TMC6-206ENST00000586271 970 ntTSL 228.91■■■□□ 2.224e-7■□□□□ 10.3
DROSHAQ9NRR4 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC25.31■■□□□ 1.648e-11■□□□□ 10.3
DROSHAQ9NRR4 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.938e-11■□□□□ 10.3
DROSHAQ9NRR4 HNRNPH3-207ENST00000480987 752 ntTSL 420.18■□□□□ 0.828e-11■□□□□ 10.3
DROSHAQ9NRR4 HNRNPH3-205ENST00000469172 3356 ntTSL 215.22■□□□□ 0.038e-11■□□□□ 10.3
DROSHAQ9NRR4 HNRNPH3-203ENST00000461310 648 ntTSL 512.71□□□□□ -0.378e-11■□□□□ 10.3
DROSHAQ9NRR4 HNRNPH3-204ENST00000467249 566 ntTSL 210.34□□□□□ -0.758e-11■□□□□ 10.3
DROSHAQ9NRR4 HNRNPH3-209ENST00000486854 635 ntTSL 210.19□□□□□ -0.788e-11■□□□□ 10.3
DROSHAQ9NRR4 SNF8-208ENST00000510195 445 ntTSL 241.33■■■■■ 4.213e-6■□□□□ 10.3
DROSHAQ9NRR4 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC41.22■■■■■ 4.193e-6■□□□□ 10.3
DROSHAQ9NRR4 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC39.33■■■■□ 3.899e-9■□□□□ 10.3
DROSHAQ9NRR4 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC37.92■■■■□ 3.663e-6■□□□□ 10.3
DROSHAQ9NRR4 SNF8-213ENST00000514929 775 ntTSL 537.48■■■■□ 3.593e-6■□□□□ 10.3
DROSHAQ9NRR4 SNF8-217ENST00000576353 700 ntTSL 535.97■■■■□ 3.353e-6■□□□□ 10.3
DROSHAQ9NRR4 SNF8-209ENST00000510558 1051 ntTSL 535.38■■■■□ 3.253e-6■□□□□ 10.3
DROSHAQ9NRR4 SNF8-216ENST00000573795 583 ntTSL 534.78■■■■□ 3.163e-6■□□□□ 10.3
DROSHAQ9NRR4 STXBP2-212ENST00000597467 821 ntTSL 334.66■■■■□ 3.143e-6■□□□□ 10.3
DROSHAQ9NRR4 STXBP2-210ENST00000595950 552 ntTSL 534.66■■■■□ 3.143e-6■□□□□ 10.3
DROSHAQ9NRR4 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC34.19■■■■□ 3.063e-6■□□□□ 10.3
DROSHAQ9NRR4 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC33.63■■■□□ 2.973e-6■□□□□ 10.3
DROSHAQ9NRR4 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC33.31■■■□□ 2.923e-6■□□□□ 10.3
DROSHAQ9NRR4 APLP2-208ENST00000526330 582 ntTSL 332.9■■■□□ 2.861e-12■□□□□ 10.3
DROSHAQ9NRR4 APLP2-209ENST00000527702 579 ntTSL 432.9■■■□□ 2.861e-12■□□□□ 10.3
DROSHAQ9NRR4 APLP2-213ENST00000529701 573 ntTSL 532.9■■■□□ 2.861e-12■□□□□ 10.3
DROSHAQ9NRR4 APLP2-214ENST00000530132 542 ntTSL 432.9■■■□□ 2.861e-12■□□□□ 10.3
DROSHAQ9NRR4 APLP2-217ENST00000533195 560 ntTSL 432.9■■■□□ 2.861e-12■□□□□ 10.3
DROSHAQ9NRR4 APLP2-218ENST00000533532 584 ntTSL 232.9■■■□□ 2.861e-12■□□□□ 10.3
DROSHAQ9NRR4 APLP2-220ENST00000533618 574 ntTSL 432.9■■■□□ 2.861e-12■□□□□ 10.3
DROSHAQ9NRR4 APLP2-221ENST00000533713 560 ntTSL 432.9■■■□□ 2.861e-12■□□□□ 10.3
DROSHAQ9NRR4 APLP2-223ENST00000534001 585 ntTSL 432.9■■■□□ 2.861e-12■□□□□ 10.3
DROSHAQ9NRR4 APLP2-224ENST00000534582 556 ntTSL 532.9■■■□□ 2.861e-12■□□□□ 10.3
DROSHAQ9NRR4 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC32.68■■■□□ 2.823e-6■□□□□ 10.3
DROSHAQ9NRR4 XBP1-205ENST00000482720 520 ntTSL 232.68■■■□□ 2.823e-6■□□□□ 10.3
DROSHAQ9NRR4 PPT2-254ENST00000493548 790 ntTSL 532.42■■■□□ 2.783e-6■□□□□ 10.3
DROSHAQ9NRR4 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC32.3■■■□□ 2.763e-6■□□□□ 10.3
DROSHAQ9NRR4 STXBP2-218ENST00000599905 589 ntTSL 431.72■■■□□ 2.673e-6■□□□□ 10.3
DROSHAQ9NRR4 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC31.7■■■□□ 2.673e-6■□□□□ 10.3
DROSHAQ9NRR4 PPT2-250ENST00000424499 722 ntTSL 331.62■■■□□ 2.653e-6■□□□□ 10.3
DROSHAQ9NRR4 PTPRF-207ENST00000436724 2168 ntTSL 1 (best)31.58■■■□□ 2.659e-9■□□□□ 10.3
DROSHAQ9NRR4 ACSL3-209ENST00000535678 560 ntTSL 331.21■■■□□ 2.593e-6■□□□□ 10.3
DROSHAQ9NRR4 KLHL22-208ENST00000470335 824 ntTSL 231.06■■■□□ 2.563e-6■□□□□ 10.3
DROSHAQ9NRR4 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC30.95■■■□□ 2.551e-12■□□□□ 10.3
DROSHAQ9NRR4 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC30.38■■■□□ 2.453e-6■□□□□ 10.3
DROSHAQ9NRR4 APLP2-216ENST00000532456 664 ntTSL 430.31■■■□□ 2.441e-12■□□□□ 10.3
DROSHAQ9NRR4 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC30.3■■■□□ 2.443e-6■□□□□ 10.3
DROSHAQ9NRR4 PPT2-249ENST00000414204 954 ntTSL 530.17■■■□□ 2.423e-6■□□□□ 10.3
DROSHAQ9NRR4 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC30.15■■■□□ 2.423e-6■□□□□ 10.3
DROSHAQ9NRR4 AC008763.2-202ENST00000599243 570 ntAPPRIS ALT2 TSL 429.87■■■□□ 2.373e-6■□□□□ 10.3
DROSHAQ9NRR4 PPT2-251ENST00000436118 633 ntTSL 429.07■■■□□ 2.243e-6■□□□□ 10.3
DROSHAQ9NRR4 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC28.75■■■□□ 2.193e-6■□□□□ 10.3
DROSHAQ9NRR4 APLP2-219ENST00000533616 2041 ntTSL 228.64■■■□□ 2.171e-12■□□□□ 10.3
DROSHAQ9NRR4 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC28.38■■■□□ 2.133e-6■□□□□ 10.3
DROSHAQ9NRR4 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC27.38■■□□□ 1.973e-6■□□□□ 10.3
DROSHAQ9NRR4 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC27.35■■□□□ 1.973e-6■□□□□ 10.3
DROSHAQ9NRR4 STXBP3-202ENST00000469338 294 ntTSL 227.24■■□□□ 1.953e-6■□□□□ 10.3
DROSHAQ9NRR4 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC26.92■■□□□ 1.93e-6■□□□□ 10.3
DROSHAQ9NRR4 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC26.63■■□□□ 1.851e-12■□□□□ 10.3
DROSHAQ9NRR4 SNF8-205ENST00000507302 742 ntTSL 326.56■■□□□ 1.843e-6■□□□□ 10.3
DROSHAQ9NRR4 CRCP-205ENST00000431089 942 ntTSL 2 BASIC26.3■■□□□ 1.83e-6■□□□□ 10.3
DROSHAQ9NRR4 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.83e-6■□□□□ 10.3
DROSHAQ9NRR4 APLP2-225ENST00000534761 551 ntTSL 526.1■■□□□ 1.771e-12■□□□□ 10.3
DROSHAQ9NRR4 PPT2-253ENST00000478521 584 ntTSL 325.72■■□□□ 1.713e-6■□□□□ 10.3
DROSHAQ9NRR4 STXBP3-204ENST00000483586 561 ntTSL 225.63■■□□□ 1.693e-6■□□□□ 10.3
DROSHAQ9NRR4 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC25.46■■□□□ 1.673e-6■□□□□ 10.3
DROSHAQ9NRR4 CRTC3-212ENST00000561218 579 ntTSL 325.37■■□□□ 1.653e-6■□□□□ 10.3
DROSHAQ9NRR4 NDRG2-244ENST00000555650 1588 ntTSL 225.21■■□□□ 1.633e-6■□□□□ 10.3
DROSHAQ9NRR4 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC25.14■■□□□ 1.613e-6■□□□□ 10.3
DROSHAQ9NRR4 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.613e-6■□□□□ 10.3
DROSHAQ9NRR4 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.583e-6■□□□□ 10.3
DROSHAQ9NRR4 MED24-225ENST00000580885 1963 ntTSL 524.78■■□□□ 1.563e-6■□□□□ 10.3
DROSHAQ9NRR4 HDGFL2-207ENST00000615225 3100 ntTSL 524.65■■□□□ 1.543e-6■□□□□ 10.3
DROSHAQ9NRR4 KLHL22-203ENST00000431430 572 ntTSL 424.48■■□□□ 1.513e-6■□□□□ 10.3
DROSHAQ9NRR4 NDRG2-271ENST00000557353 1919 ntTSL 224.22■■□□□ 1.473e-6■□□□□ 10.3
DROSHAQ9NRR4 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC24.21■■□□□ 1.473e-6■□□□□ 10.3
DROSHAQ9NRR4 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC24.11■■□□□ 1.453e-6■□□□□ 10.3
DROSHAQ9NRR4 AC008763.2-201ENST00000598664 537 ntAPPRIS P5 TSL 524.1■■□□□ 1.453e-6■□□□□ 10.3
DROSHAQ9NRR4 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.413e-6■□□□□ 10.3
DROSHAQ9NRR4 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC23.78■■□□□ 1.43e-6■□□□□ 10.3
DROSHAQ9NRR4 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC23.53■■□□□ 1.363e-6■□□□□ 10.3
DROSHAQ9NRR4 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC23.45■■□□□ 1.343e-6■□□□□ 10.3
DROSHAQ9NRR4 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC23.38■■□□□ 1.333e-6■□□□□ 10.3
DROSHAQ9NRR4 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC23.38■■□□□ 1.333e-6■□□□□ 10.3
DROSHAQ9NRR4 KLHL22-207ENST00000458248 742 ntTSL 323.25■■□□□ 1.313e-6■□□□□ 10.3
DROSHAQ9NRR4 KLHL22-211ENST00000490556 708 ntTSL 323.14■■□□□ 1.293e-6■□□□□ 10.3
DROSHAQ9NRR4 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC23.06■■□□□ 1.283e-6■□□□□ 10.3
DROSHAQ9NRR4 KLHL22-205ENST00000444967 1045 ntTSL 323.01■■□□□ 1.273e-6■□□□□ 10.3
Retrieved 100 of 16,331 protein–RNA pairs in 66.8 ms