Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC19.53■□□□□ 0.72
PDLIM7Q9NR12 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC19.53■□□□□ 0.72
PDLIM7Q9NR12 AC073592.5-201ENST00000624854 528 ntBASIC19.53■□□□□ 0.72
PDLIM7Q9NR12 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
PDLIM7Q9NR12 PC-208ENST00000529047 1607 ntTSL 3 BASIC19.53■□□□□ 0.72
PDLIM7Q9NR12 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PDLIM7Q9NR12 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PDLIM7Q9NR12 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
PDLIM7Q9NR12 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PDLIM7Q9NR12 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PDLIM7Q9NR12 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC19.52■□□□□ 0.72
PDLIM7Q9NR12 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
PDLIM7Q9NR12 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
PDLIM7Q9NR12 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
PDLIM7Q9NR12 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC19.52■□□□□ 0.72
PDLIM7Q9NR12 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
PDLIM7Q9NR12 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PDLIM7Q9NR12 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PDLIM7Q9NR12 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PDLIM7Q9NR12 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PDLIM7Q9NR12 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PDLIM7Q9NR12 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
PDLIM7Q9NR12 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC19.52■□□□□ 0.72
PDLIM7Q9NR12 RPS15P9-201ENST00000494093 319 ntBASIC19.52■□□□□ 0.72
PDLIM7Q9NR12 AP000344.2-201ENST00000512987 629 ntBASIC19.52■□□□□ 0.72
PDLIM7Q9NR12 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
PDLIM7Q9NR12 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
PDLIM7Q9NR12 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC19.52■□□□□ 0.72
PDLIM7Q9NR12 AC004790.2-201ENST00000623588 572 ntBASIC19.52■□□□□ 0.72
PDLIM7Q9NR12 AC132938.5-201ENST00000624980 1813 ntBASIC19.52■□□□□ 0.72
PDLIM7Q9NR12 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
PDLIM7Q9NR12 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PDLIM7Q9NR12 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PDLIM7Q9NR12 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
PDLIM7Q9NR12 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
PDLIM7Q9NR12 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC19.52■□□□□ 0.71
PDLIM7Q9NR12 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
PDLIM7Q9NR12 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
PDLIM7Q9NR12 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
PDLIM7Q9NR12 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PDLIM7Q9NR12 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PDLIM7Q9NR12 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PDLIM7Q9NR12 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC19.51■□□□□ 0.71
PDLIM7Q9NR12 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PDLIM7Q9NR12 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC19.51■□□□□ 0.71
PDLIM7Q9NR12 HLA-J-203ENST00000494367 1087 ntBASIC19.51■□□□□ 0.71
PDLIM7Q9NR12 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC19.51■□□□□ 0.71
PDLIM7Q9NR12 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
PDLIM7Q9NR12 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC19.51■□□□□ 0.71
PDLIM7Q9NR12 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
PDLIM7Q9NR12 CYB561-217ENST00000582997 877 ntTSL 5 BASIC19.51■□□□□ 0.71
PDLIM7Q9NR12 AC093512.1-201ENST00000617969 520 ntBASIC19.51■□□□□ 0.71
PDLIM7Q9NR12 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC19.51■□□□□ 0.71
PDLIM7Q9NR12 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PDLIM7Q9NR12 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC19.51■□□□□ 0.71
PDLIM7Q9NR12 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
PDLIM7Q9NR12 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PDLIM7Q9NR12 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
PDLIM7Q9NR12 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
PDLIM7Q9NR12 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
PDLIM7Q9NR12 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PDLIM7Q9NR12 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PDLIM7Q9NR12 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
PDLIM7Q9NR12 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC19.5■□□□□ 0.71
PDLIM7Q9NR12 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC19.5■□□□□ 0.71
PDLIM7Q9NR12 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PDLIM7Q9NR12 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
PDLIM7Q9NR12 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PDLIM7Q9NR12 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
PDLIM7Q9NR12 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PDLIM7Q9NR12 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PDLIM7Q9NR12 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PDLIM7Q9NR12 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC19.5■□□□□ 0.71
PDLIM7Q9NR12 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC19.5■□□□□ 0.71
PDLIM7Q9NR12 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PDLIM7Q9NR12 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC19.5■□□□□ 0.71
PDLIM7Q9NR12 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PDLIM7Q9NR12 RPL28-205ENST00000558131 444 ntTSL 5 BASIC19.5■□□□□ 0.71
PDLIM7Q9NR12 GREM1-201ENST00000560677 623 ntTSL 4 BASIC19.5■□□□□ 0.71
PDLIM7Q9NR12 AC109462.3-201ENST00000573934 613 ntBASIC19.5■□□□□ 0.71
PDLIM7Q9NR12 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PDLIM7Q9NR12 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PDLIM7Q9NR12 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PDLIM7Q9NR12 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PDLIM7Q9NR12 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PDLIM7Q9NR12 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
PDLIM7Q9NR12 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.49■□□□□ 0.71
PDLIM7Q9NR12 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PDLIM7Q9NR12 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
PDLIM7Q9NR12 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC19.49■□□□□ 0.71
PDLIM7Q9NR12 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
PDLIM7Q9NR12 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PDLIM7Q9NR12 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PDLIM7Q9NR12 STOM-202ENST00000347359 870 ntTSL 2 BASIC19.49■□□□□ 0.71
PDLIM7Q9NR12 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PDLIM7Q9NR12 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PDLIM7Q9NR12 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PDLIM7Q9NR12 AL020989.1-201ENST00000422979 469 ntBASIC19.49■□□□□ 0.71
PDLIM7Q9NR12 AC002558.1-201ENST00000488906 803 ntBASIC19.49■□□□□ 0.71
PDLIM7Q9NR12 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms