Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
RTN4Q9NQC3 NFIC-211ENST00000641145 8399 ntBASIC20.75■□□□□ 0.91
RTN4Q9NQC3 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
RTN4Q9NQC3 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RTN4Q9NQC3 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RTN4Q9NQC3 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RTN4Q9NQC3 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RTN4Q9NQC3 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RTN4Q9NQC3 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RTN4Q9NQC3 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RTN4Q9NQC3 AP000437.1-201ENST00000624057 2085 ntBASIC20.74■□□□□ 0.91
RTN4Q9NQC3 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
RTN4Q9NQC3 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC20.74■□□□□ 0.91
RTN4Q9NQC3 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RTN4Q9NQC3 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
RTN4Q9NQC3 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RTN4Q9NQC3 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
RTN4Q9NQC3 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RTN4Q9NQC3 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RTN4Q9NQC3 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
RTN4Q9NQC3 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RTN4Q9NQC3 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RTN4Q9NQC3 POM121L13P-201ENST00000422362 380 ntBASIC20.74■□□□□ 0.91
RTN4Q9NQC3 AC069152.1-201ENST00000438030 544 ntBASIC20.74■□□□□ 0.91
RTN4Q9NQC3 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.74■□□□□ 0.91
RTN4Q9NQC3 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC20.74■□□□□ 0.91
RTN4Q9NQC3 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.74■□□□□ 0.91
RTN4Q9NQC3 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.74■□□□□ 0.91
RTN4Q9NQC3 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
RTN4Q9NQC3 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
RTN4Q9NQC3 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
RTN4Q9NQC3 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.74■□□□□ 0.91
RTN4Q9NQC3 AC133041.1-202ENST00000642053 222 ntBASIC20.74■□□□□ 0.91
RTN4Q9NQC3 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
RTN4Q9NQC3 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RTN4Q9NQC3 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RTN4Q9NQC3 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RTN4Q9NQC3 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.74■□□□□ 0.91
RTN4Q9NQC3 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC20.74■□□□□ 0.91
RTN4Q9NQC3 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RTN4Q9NQC3 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RTN4Q9NQC3 KRT8P41-201ENST00000533985 1514 ntBASIC20.73■□□□□ 0.91
RTN4Q9NQC3 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RTN4Q9NQC3 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RTN4Q9NQC3 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RTN4Q9NQC3 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RTN4Q9NQC3 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RTN4Q9NQC3 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RTN4Q9NQC3 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.73■□□□□ 0.91
RTN4Q9NQC3 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RTN4Q9NQC3 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
RTN4Q9NQC3 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RTN4Q9NQC3 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
RTN4Q9NQC3 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC20.73■□□□□ 0.91
RTN4Q9NQC3 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RTN4Q9NQC3 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.73■□□□□ 0.91
RTN4Q9NQC3 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.73■□□□□ 0.91
RTN4Q9NQC3 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.73■□□□□ 0.91
RTN4Q9NQC3 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC20.73■□□□□ 0.91
RTN4Q9NQC3 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RTN4Q9NQC3 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
RTN4Q9NQC3 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RTN4Q9NQC3 AL499627.1-201ENST00000569373 2188 ntBASIC20.73■□□□□ 0.91
RTN4Q9NQC3 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.73■□□□□ 0.91
RTN4Q9NQC3 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RTN4Q9NQC3 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RTN4Q9NQC3 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RTN4Q9NQC3 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RTN4Q9NQC3 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RTN4Q9NQC3 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RTN4Q9NQC3 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RTN4Q9NQC3 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RTN4Q9NQC3 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RTN4Q9NQC3 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
RTN4Q9NQC3 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RTN4Q9NQC3 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RTN4Q9NQC3 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RTN4Q9NQC3 AL512274.1-201ENST00000562471 2027 ntBASIC20.72■□□□□ 0.91
RTN4Q9NQC3 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
RTN4Q9NQC3 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
RTN4Q9NQC3 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RTN4Q9NQC3 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RTN4Q9NQC3 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
RTN4Q9NQC3 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RTN4Q9NQC3 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.72■□□□□ 0.91
RTN4Q9NQC3 NBPF21P-201ENST00000425093 1451 ntBASIC20.72■□□□□ 0.91
RTN4Q9NQC3 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20.72■□□□□ 0.91
RTN4Q9NQC3 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RTN4Q9NQC3 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
RTN4Q9NQC3 AL009178.2-201ENST00000597278 2719 ntBASIC20.72■□□□□ 0.91
RTN4Q9NQC3 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RTN4Q9NQC3 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RTN4Q9NQC3 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RTN4Q9NQC3 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC20.72■□□□□ 0.91
RTN4Q9NQC3 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RTN4Q9NQC3 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RTN4Q9NQC3 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
RTN4Q9NQC3 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC20.72■□□□□ 0.91
RTN4Q9NQC3 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RTN4Q9NQC3 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms