Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
VCX3AQ9NNX9 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.4■□□□□ 0.22
VCX3AQ9NNX9 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
VCX3AQ9NNX9 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
VCX3AQ9NNX9 KRT8P41-201ENST00000533985 1514 ntBASIC16.4■□□□□ 0.22
VCX3AQ9NNX9 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
VCX3AQ9NNX9 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.39■□□□□ 0.22
VCX3AQ9NNX9 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.39■□□□□ 0.22
VCX3AQ9NNX9 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
VCX3AQ9NNX9 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
VCX3AQ9NNX9 AC008406.3-201ENST00000620001 1374 ntBASIC16.39■□□□□ 0.21
VCX3AQ9NNX9 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
VCX3AQ9NNX9 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
VCX3AQ9NNX9 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
VCX3AQ9NNX9 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC16.39■□□□□ 0.21
VCX3AQ9NNX9 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC16.39■□□□□ 0.21
VCX3AQ9NNX9 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VCX3AQ9NNX9 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
VCX3AQ9NNX9 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC16.39■□□□□ 0.21
VCX3AQ9NNX9 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
VCX3AQ9NNX9 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC16.39■□□□□ 0.21
VCX3AQ9NNX9 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
VCX3AQ9NNX9 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VCX3AQ9NNX9 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VCX3AQ9NNX9 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VCX3AQ9NNX9 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VCX3AQ9NNX9 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.39■□□□□ 0.21
VCX3AQ9NNX9 PLD4-205ENST00000553861 667 ntTSL 2 BASIC16.39■□□□□ 0.21
VCX3AQ9NNX9 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC16.39■□□□□ 0.21
VCX3AQ9NNX9 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VCX3AQ9NNX9 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.21
VCX3AQ9NNX9 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.39■□□□□ 0.21
VCX3AQ9NNX9 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
VCX3AQ9NNX9 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VCX3AQ9NNX9 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
VCX3AQ9NNX9 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VCX3AQ9NNX9 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
VCX3AQ9NNX9 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
VCX3AQ9NNX9 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
VCX3AQ9NNX9 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VCX3AQ9NNX9 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
VCX3AQ9NNX9 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.39■□□□□ 0.21
VCX3AQ9NNX9 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VCX3AQ9NNX9 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VCX3AQ9NNX9 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.38■□□□□ 0.21
VCX3AQ9NNX9 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.38■□□□□ 0.21
VCX3AQ9NNX9 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VCX3AQ9NNX9 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VCX3AQ9NNX9 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
VCX3AQ9NNX9 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VCX3AQ9NNX9 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VCX3AQ9NNX9 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
VCX3AQ9NNX9 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
VCX3AQ9NNX9 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
VCX3AQ9NNX9 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VCX3AQ9NNX9 ENSA-205ENST00000361532 792 ntTSL 2 BASIC16.38■□□□□ 0.21
VCX3AQ9NNX9 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
VCX3AQ9NNX9 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC16.38■□□□□ 0.21
VCX3AQ9NNX9 AL512625.2-201ENST00000417533 625 ntBASIC16.38■□□□□ 0.21
VCX3AQ9NNX9 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC16.38■□□□□ 0.21
VCX3AQ9NNX9 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC16.38■□□□□ 0.21
VCX3AQ9NNX9 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
VCX3AQ9NNX9 HLA-A-209ENST00000638375 975 ntBASIC16.38■□□□□ 0.21
VCX3AQ9NNX9 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VCX3AQ9NNX9 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.38■□□□□ 0.21
VCX3AQ9NNX9 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VCX3AQ9NNX9 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
VCX3AQ9NNX9 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
VCX3AQ9NNX9 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VCX3AQ9NNX9 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.38■□□□□ 0.21
VCX3AQ9NNX9 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
VCX3AQ9NNX9 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.38■□□□□ 0.21
VCX3AQ9NNX9 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VCX3AQ9NNX9 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VCX3AQ9NNX9 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VCX3AQ9NNX9 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.38■□□□□ 0.21
VCX3AQ9NNX9 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VCX3AQ9NNX9 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
VCX3AQ9NNX9 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC16.38■□□□□ 0.21
VCX3AQ9NNX9 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
VCX3AQ9NNX9 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
VCX3AQ9NNX9 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.38■□□□□ 0.21
VCX3AQ9NNX9 HLA-J-201ENST00000462773 1622 ntBASIC16.37■□□□□ 0.21
VCX3AQ9NNX9 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.37■□□□□ 0.21
VCX3AQ9NNX9 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC16.37■□□□□ 0.21
VCX3AQ9NNX9 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
VCX3AQ9NNX9 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.37■□□□□ 0.21
VCX3AQ9NNX9 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VCX3AQ9NNX9 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VCX3AQ9NNX9 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
VCX3AQ9NNX9 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
VCX3AQ9NNX9 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC16.37■□□□□ 0.21
VCX3AQ9NNX9 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VCX3AQ9NNX9 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
VCX3AQ9NNX9 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.37■□□□□ 0.21
VCX3AQ9NNX9 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16.37■□□□□ 0.21
VCX3AQ9NNX9 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VCX3AQ9NNX9 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VCX3AQ9NNX9 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
VCX3AQ9NNX9 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms