Protein–RNA interactions for Protein: Q9HB58

SP110, Sp110 nuclear body protein, humanhuman

Predictions only

Length 689 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP110Q9HB58 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SP110Q9HB58 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SP110Q9HB58 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.96■□□□□ 0.47
SP110Q9HB58 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SP110Q9HB58 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
SP110Q9HB58 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
SP110Q9HB58 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
SP110Q9HB58 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SP110Q9HB58 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SP110Q9HB58 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.95■□□□□ 0.46
SP110Q9HB58 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SP110Q9HB58 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SP110Q9HB58 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
SP110Q9HB58 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.95■□□□□ 0.46
SP110Q9HB58 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SP110Q9HB58 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.95■□□□□ 0.46
SP110Q9HB58 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SP110Q9HB58 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
SP110Q9HB58 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SP110Q9HB58 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SP110Q9HB58 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SP110Q9HB58 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SP110Q9HB58 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SP110Q9HB58 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.95■□□□□ 0.46
SP110Q9HB58 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.95■□□□□ 0.46
SP110Q9HB58 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SP110Q9HB58 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SP110Q9HB58 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.95■□□□□ 0.46
SP110Q9HB58 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.95■□□□□ 0.46
SP110Q9HB58 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.95■□□□□ 0.46
SP110Q9HB58 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.95■□□□□ 0.46
SP110Q9HB58 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
SP110Q9HB58 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
SP110Q9HB58 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.95■□□□□ 0.46
SP110Q9HB58 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SP110Q9HB58 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SP110Q9HB58 KRT8P10-201ENST00000450021 1447 ntBASIC17.95■□□□□ 0.46
SP110Q9HB58 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SP110Q9HB58 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.95■□□□□ 0.46
SP110Q9HB58 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SP110Q9HB58 AL049757.1-201ENST00000616842 1596 ntBASIC17.95■□□□□ 0.46
SP110Q9HB58 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.95■□□□□ 0.46
SP110Q9HB58 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SP110Q9HB58 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
SP110Q9HB58 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SP110Q9HB58 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.95■□□□□ 0.46
SP110Q9HB58 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SP110Q9HB58 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SP110Q9HB58 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SP110Q9HB58 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SP110Q9HB58 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SP110Q9HB58 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.94■□□□□ 0.46
SP110Q9HB58 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SP110Q9HB58 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.94■□□□□ 0.46
SP110Q9HB58 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SP110Q9HB58 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SP110Q9HB58 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.94■□□□□ 0.46
SP110Q9HB58 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SP110Q9HB58 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
SP110Q9HB58 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SP110Q9HB58 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SP110Q9HB58 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.94■□□□□ 0.46
SP110Q9HB58 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC17.94■□□□□ 0.46
SP110Q9HB58 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.94■□□□□ 0.46
SP110Q9HB58 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
SP110Q9HB58 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SP110Q9HB58 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.94■□□□□ 0.46
SP110Q9HB58 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
SP110Q9HB58 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.94■□□□□ 0.46
SP110Q9HB58 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.94■□□□□ 0.46
SP110Q9HB58 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SP110Q9HB58 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.94■□□□□ 0.46
SP110Q9HB58 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SP110Q9HB58 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SP110Q9HB58 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
SP110Q9HB58 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SP110Q9HB58 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SP110Q9HB58 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
SP110Q9HB58 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SP110Q9HB58 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.94■□□□□ 0.46
SP110Q9HB58 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SP110Q9HB58 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SP110Q9HB58 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SP110Q9HB58 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SP110Q9HB58 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.93■□□□□ 0.46
SP110Q9HB58 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
SP110Q9HB58 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SP110Q9HB58 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SP110Q9HB58 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SP110Q9HB58 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SP110Q9HB58 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SP110Q9HB58 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SP110Q9HB58 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SP110Q9HB58 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SP110Q9HB58 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SP110Q9HB58 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
SP110Q9HB58 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.93■□□□□ 0.46
SP110Q9HB58 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.93■□□□□ 0.46
SP110Q9HB58 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.93■□□□□ 0.46
SP110Q9HB58 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms