Protein–RNA interactions for Protein: Q9H7E2

TDRD3, Tudor domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 651 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TDRD3Q9H7E2 AC046185.3-201ENST00000623228 1824 ntBASIC20.64■□□□□ 0.9
TDRD3Q9H7E2 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC20.64■□□□□ 0.9
TDRD3Q9H7E2 BX323043.1-201ENST00000641006 1765 ntBASIC20.64■□□□□ 0.9
TDRD3Q9H7E2 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
TDRD3Q9H7E2 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TDRD3Q9H7E2 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TDRD3Q9H7E2 AC006116.8-202ENST00000587620 1550 ntBASIC20.64■□□□□ 0.9
TDRD3Q9H7E2 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
TDRD3Q9H7E2 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
TDRD3Q9H7E2 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
TDRD3Q9H7E2 FLJ13224-201ENST00000313737 1514 ntBASIC20.64■□□□□ 0.9
TDRD3Q9H7E2 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TDRD3Q9H7E2 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC20.64■□□□□ 0.89
TDRD3Q9H7E2 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
TDRD3Q9H7E2 ENSA-206ENST00000361631 725 ntTSL 2 BASIC20.64■□□□□ 0.89
TDRD3Q9H7E2 DDT-204ENST00000404092 805 ntTSL 3 BASIC20.64■□□□□ 0.89
TDRD3Q9H7E2 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
TDRD3Q9H7E2 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
TDRD3Q9H7E2 AL513480.1-201ENST00000451731 511 ntBASIC20.64■□□□□ 0.89
TDRD3Q9H7E2 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
TDRD3Q9H7E2 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TDRD3Q9H7E2 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC20.64■□□□□ 0.89
TDRD3Q9H7E2 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TDRD3Q9H7E2 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC20.64■□□□□ 0.89
TDRD3Q9H7E2 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC20.64■□□□□ 0.89
TDRD3Q9H7E2 ACTL9-202ENST00000612068 1252 ntBASIC20.64■□□□□ 0.89
TDRD3Q9H7E2 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TDRD3Q9H7E2 PODN-203ENST00000395871 2744 ntTSL 5 BASIC20.64■□□□□ 0.89
TDRD3Q9H7E2 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TDRD3Q9H7E2 AC104581.1-202ENST00000635932 2618 ntBASIC20.64■□□□□ 0.89
TDRD3Q9H7E2 MADD-208ENST00000405573 1823 ntTSL 5 BASIC20.64■□□□□ 0.89
TDRD3Q9H7E2 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TDRD3Q9H7E2 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.64■□□□□ 0.89
TDRD3Q9H7E2 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC20.64■□□□□ 0.89
TDRD3Q9H7E2 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TDRD3Q9H7E2 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.89
TDRD3Q9H7E2 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC20.64■□□□□ 0.89
TDRD3Q9H7E2 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TDRD3Q9H7E2 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.63■□□□□ 0.89
TDRD3Q9H7E2 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TDRD3Q9H7E2 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TDRD3Q9H7E2 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TDRD3Q9H7E2 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
TDRD3Q9H7E2 AC090164.3-201ENST00000610780 2143 ntBASIC20.63■□□□□ 0.89
TDRD3Q9H7E2 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
TDRD3Q9H7E2 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC20.63■□□□□ 0.89
TDRD3Q9H7E2 GOLGA6L17P-202ENST00000614358 1398 ntBASIC20.63■□□□□ 0.89
TDRD3Q9H7E2 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
TDRD3Q9H7E2 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
TDRD3Q9H7E2 MIR770-201ENST00000390219 98 ntBASIC20.63■□□□□ 0.89
TDRD3Q9H7E2 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
TDRD3Q9H7E2 NABP1-203ENST00000409510 843 ntTSL 5 BASIC20.63■□□□□ 0.89
TDRD3Q9H7E2 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TDRD3Q9H7E2 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
TDRD3Q9H7E2 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC20.63■□□□□ 0.89
TDRD3Q9H7E2 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
TDRD3Q9H7E2 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC20.63■□□□□ 0.89
TDRD3Q9H7E2 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC20.63■□□□□ 0.89
TDRD3Q9H7E2 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC20.63■□□□□ 0.89
TDRD3Q9H7E2 RNF34-208ENST00000555076 593 ntTSL 3 BASIC20.63■□□□□ 0.89
TDRD3Q9H7E2 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
TDRD3Q9H7E2 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC20.63■□□□□ 0.89
TDRD3Q9H7E2 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.63■□□□□ 0.89
TDRD3Q9H7E2 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TDRD3Q9H7E2 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TDRD3Q9H7E2 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TDRD3Q9H7E2 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TDRD3Q9H7E2 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
TDRD3Q9H7E2 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TDRD3Q9H7E2 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TDRD3Q9H7E2 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TDRD3Q9H7E2 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TDRD3Q9H7E2 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TDRD3Q9H7E2 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TDRD3Q9H7E2 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TDRD3Q9H7E2 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TDRD3Q9H7E2 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC20.62■□□□□ 0.89
TDRD3Q9H7E2 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TDRD3Q9H7E2 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TDRD3Q9H7E2 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TDRD3Q9H7E2 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
TDRD3Q9H7E2 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TDRD3Q9H7E2 PAWRP1-201ENST00000451083 565 ntBASIC20.62■□□□□ 0.89
TDRD3Q9H7E2 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC20.62■□□□□ 0.89
TDRD3Q9H7E2 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TDRD3Q9H7E2 AC004835.2-201ENST00000603762 682 ntBASIC20.62■□□□□ 0.89
TDRD3Q9H7E2 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TDRD3Q9H7E2 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TDRD3Q9H7E2 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TDRD3Q9H7E2 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TDRD3Q9H7E2 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC20.62■□□□□ 0.89
TDRD3Q9H7E2 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC20.61■□□□□ 0.89
TDRD3Q9H7E2 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC20.61■□□□□ 0.89
TDRD3Q9H7E2 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TDRD3Q9H7E2 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TDRD3Q9H7E2 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TDRD3Q9H7E2 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TDRD3Q9H7E2 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
TDRD3Q9H7E2 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TDRD3Q9H7E2 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms