Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FOXP3Q9BZS1 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC18.1■□□□□ 0.49
FOXP3Q9BZS1 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FOXP3Q9BZS1 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC18.1■□□□□ 0.49
FOXP3Q9BZS1 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
FOXP3Q9BZS1 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC18.1■□□□□ 0.49
FOXP3Q9BZS1 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
FOXP3Q9BZS1 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.1■□□□□ 0.49
FOXP3Q9BZS1 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FOXP3Q9BZS1 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FOXP3Q9BZS1 AC026396.1-201ENST00000419388 421 ntBASIC18.1■□□□□ 0.49
FOXP3Q9BZS1 ATP5G2P1-201ENST00000433580 426 ntBASIC18.1■□□□□ 0.49
FOXP3Q9BZS1 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
FOXP3Q9BZS1 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.1■□□□□ 0.49
FOXP3Q9BZS1 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC18.1■□□□□ 0.49
FOXP3Q9BZS1 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FOXP3Q9BZS1 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
FOXP3Q9BZS1 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC18.1■□□□□ 0.49
FOXP3Q9BZS1 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
FOXP3Q9BZS1 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
FOXP3Q9BZS1 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
FOXP3Q9BZS1 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FOXP3Q9BZS1 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FOXP3Q9BZS1 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
FOXP3Q9BZS1 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC18.09■□□□□ 0.49
FOXP3Q9BZS1 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FOXP3Q9BZS1 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
FOXP3Q9BZS1 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
FOXP3Q9BZS1 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.09■□□□□ 0.49
FOXP3Q9BZS1 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
FOXP3Q9BZS1 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FOXP3Q9BZS1 AC106820.2-201ENST00000563775 3264 ntBASIC18.09■□□□□ 0.49
FOXP3Q9BZS1 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FOXP3Q9BZS1 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FOXP3Q9BZS1 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FOXP3Q9BZS1 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FOXP3Q9BZS1 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FOXP3Q9BZS1 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.09■□□□□ 0.49
FOXP3Q9BZS1 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
FOXP3Q9BZS1 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.09■□□□□ 0.49
FOXP3Q9BZS1 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.09■□□□□ 0.49
FOXP3Q9BZS1 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.09■□□□□ 0.49
FOXP3Q9BZS1 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.09■□□□□ 0.49
FOXP3Q9BZS1 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.09■□□□□ 0.49
FOXP3Q9BZS1 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FOXP3Q9BZS1 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.09■□□□□ 0.49
FOXP3Q9BZS1 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.09■□□□□ 0.49
FOXP3Q9BZS1 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.09■□□□□ 0.49
FOXP3Q9BZS1 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
FOXP3Q9BZS1 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.09■□□□□ 0.49
FOXP3Q9BZS1 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
FOXP3Q9BZS1 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.09■□□□□ 0.49
FOXP3Q9BZS1 VPS72-207ENST00000640458 689 ntTSL 5 BASIC18.09■□□□□ 0.49
FOXP3Q9BZS1 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FOXP3Q9BZS1 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.09■□□□□ 0.49
FOXP3Q9BZS1 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC18.09■□□□□ 0.49
FOXP3Q9BZS1 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FOXP3Q9BZS1 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FOXP3Q9BZS1 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
FOXP3Q9BZS1 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.09■□□□□ 0.49
FOXP3Q9BZS1 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
FOXP3Q9BZS1 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FOXP3Q9BZS1 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
FOXP3Q9BZS1 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
FOXP3Q9BZS1 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.08■□□□□ 0.49
FOXP3Q9BZS1 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
FOXP3Q9BZS1 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
FOXP3Q9BZS1 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
FOXP3Q9BZS1 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
FOXP3Q9BZS1 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
FOXP3Q9BZS1 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
FOXP3Q9BZS1 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
FOXP3Q9BZS1 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
FOXP3Q9BZS1 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC18.08■□□□□ 0.48
FOXP3Q9BZS1 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
FOXP3Q9BZS1 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
FOXP3Q9BZS1 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
FOXP3Q9BZS1 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
FOXP3Q9BZS1 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
FOXP3Q9BZS1 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.08■□□□□ 0.48
FOXP3Q9BZS1 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.08■□□□□ 0.48
FOXP3Q9BZS1 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC18.08■□□□□ 0.48
FOXP3Q9BZS1 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
FOXP3Q9BZS1 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
FOXP3Q9BZS1 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
FOXP3Q9BZS1 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
FOXP3Q9BZS1 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
FOXP3Q9BZS1 AC116353.5-201ENST00000638148 1699 ntBASIC18.08■□□□□ 0.48
FOXP3Q9BZS1 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
FOXP3Q9BZS1 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
FOXP3Q9BZS1 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
FOXP3Q9BZS1 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
FOXP3Q9BZS1 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.07■□□□□ 0.48
FOXP3Q9BZS1 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
FOXP3Q9BZS1 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
FOXP3Q9BZS1 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
FOXP3Q9BZS1 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
FOXP3Q9BZS1 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
FOXP3Q9BZS1 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
FOXP3Q9BZS1 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms