Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
KRTAP3-3Q9BYR6 ZNF93-206ENST00000592160 1334 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
KRTAP3-3Q9BYR6 OR8G3P-203ENST00000641848 1344 ntBASIC11.01□□□□□ -0.65
KRTAP3-3Q9BYR6 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
KRTAP3-3Q9BYR6 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
KRTAP3-3Q9BYR6 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC11.01□□□□□ -0.65
KRTAP3-3Q9BYR6 FMO11P-201ENST00000424742 1370 ntBASIC11.01□□□□□ -0.65
KRTAP3-3Q9BYR6 COPS3-203ENST00000439936 1394 ntTSL 5 BASIC11.01□□□□□ -0.65
KRTAP3-3Q9BYR6 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
KRTAP3-3Q9BYR6 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
KRTAP3-3Q9BYR6 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
KRTAP3-3Q9BYR6 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC11.01□□□□□ -0.65
KRTAP3-3Q9BYR6 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
KRTAP3-3Q9BYR6 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
KRTAP3-3Q9BYR6 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
KRTAP3-3Q9BYR6 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC11□□□□□ -0.65
KRTAP3-3Q9BYR6 ATP6V1C1-205ENST00000521514 1484 ntTSL 1 (best) BASIC11□□□□□ -0.65
KRTAP3-3Q9BYR6 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
KRTAP3-3Q9BYR6 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
KRTAP3-3Q9BYR6 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
KRTAP3-3Q9BYR6 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC11□□□□□ -0.65
KRTAP3-3Q9BYR6 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC11□□□□□ -0.65
KRTAP3-3Q9BYR6 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC11□□□□□ -0.65
KRTAP3-3Q9BYR6 AC139530.1-201ENST00000575312 1977 ntBASIC11□□□□□ -0.65
KRTAP3-3Q9BYR6 SRSF10-214ENST00000492112 1631 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
KRTAP3-3Q9BYR6 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
KRTAP3-3Q9BYR6 AKR1C4-201ENST00000263126 1192 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
KRTAP3-3Q9BYR6 MRPS28-201ENST00000276585 850 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
KRTAP3-3Q9BYR6 CSRP2-201ENST00000311083 943 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
KRTAP3-3Q9BYR6 DEFB105B-201ENST00000335510 331 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
KRTAP3-3Q9BYR6 RN7SKP75-201ENST00000363070 296 ntBASIC11□□□□□ -0.65
KRTAP3-3Q9BYR6 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC11□□□□□ -0.65
KRTAP3-3Q9BYR6 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
KRTAP3-3Q9BYR6 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC11□□□□□ -0.65
KRTAP3-3Q9BYR6 RN7SKP278-201ENST00000410504 342 ntBASIC11□□□□□ -0.65
KRTAP3-3Q9BYR6 LINC01687-201ENST00000416327 795 ntTSL 3 BASIC11□□□□□ -0.65
KRTAP3-3Q9BYR6 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC11□□□□□ -0.65
KRTAP3-3Q9BYR6 AC013262.1-201ENST00000426710 252 ntBASIC11□□□□□ -0.65
KRTAP3-3Q9BYR6 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC11□□□□□ -0.65
KRTAP3-3Q9BYR6 MTCO1P43-201ENST00000431831 488 ntBASIC11□□□□□ -0.65
KRTAP3-3Q9BYR6 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC11□□□□□ -0.65
KRTAP3-3Q9BYR6 AC018797.2-201ENST00000501133 883 ntTSL 2 BASIC11□□□□□ -0.65
KRTAP3-3Q9BYR6 ABHD17AP3-201ENST00000503096 1137 ntBASIC11□□□□□ -0.65
KRTAP3-3Q9BYR6 AC069306.1-201ENST00000507006 843 ntBASIC11□□□□□ -0.65
KRTAP3-3Q9BYR6 AC017037.1-201ENST00000508460 471 ntBASIC11□□□□□ -0.65
KRTAP3-3Q9BYR6 AC093827.3-201ENST00000514631 1110 ntBASIC11□□□□□ -0.65
KRTAP3-3Q9BYR6 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC11□□□□□ -0.65
KRTAP3-3Q9BYR6 AC087672.3-201ENST00000519323 738 ntTSL 1 (best) BASIC11□□□□□ -0.65
KRTAP3-3Q9BYR6 AP001207.2-201ENST00000519490 539 ntBASIC11□□□□□ -0.65
KRTAP3-3Q9BYR6 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC11□□□□□ -0.65
KRTAP3-3Q9BYR6 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC11□□□□□ -0.65
KRTAP3-3Q9BYR6 OR7E14P-202ENST00000530490 1290 ntBASIC11□□□□□ -0.65
KRTAP3-3Q9BYR6 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC11□□□□□ -0.65
KRTAP3-3Q9BYR6 AC023310.1-201ENST00000554836 735 ntBASIC11□□□□□ -0.65
KRTAP3-3Q9BYR6 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC11□□□□□ -0.65
KRTAP3-3Q9BYR6 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC11□□□□□ -0.65
KRTAP3-3Q9BYR6 AC027088.3-201ENST00000559495 872 ntTSL 3 BASIC11□□□□□ -0.65
KRTAP3-3Q9BYR6 AC018868.2-201ENST00000559655 1259 ntBASIC11□□□□□ -0.65
KRTAP3-3Q9BYR6 EIF5A2P1-201ENST00000564027 460 ntBASIC11□□□□□ -0.65
KRTAP3-3Q9BYR6 AC027455.1-201ENST00000574104 594 ntBASIC11□□□□□ -0.65
KRTAP3-3Q9BYR6 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC11□□□□□ -0.65
KRTAP3-3Q9BYR6 SSH2-211ENST00000590153 570 ntTSL 4 BASIC11□□□□□ -0.65
KRTAP3-3Q9BYR6 AC006547.3-201ENST00000600090 583 ntTSL 3 BASIC11□□□□□ -0.65
KRTAP3-3Q9BYR6 AL731533.2-201ENST00000607898 578 ntBASIC11□□□□□ -0.65
KRTAP3-3Q9BYR6 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC11□□□□□ -0.65
KRTAP3-3Q9BYR6 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC11□□□□□ -0.65
KRTAP3-3Q9BYR6 PAX8-AS1-217ENST00000617509 627 ntTSL 4 BASIC11□□□□□ -0.65
KRTAP3-3Q9BYR6 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
KRTAP3-3Q9BYR6 GMNN-207ENST00000620958 1039 ntAPPRIS P1 TSL 3 BASIC11□□□□□ -0.65
KRTAP3-3Q9BYR6 LINC02498-201ENST00000635390 1065 ntTSL 5 BASIC11□□□□□ -0.65
KRTAP3-3Q9BYR6 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
KRTAP3-3Q9BYR6 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
KRTAP3-3Q9BYR6 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
KRTAP3-3Q9BYR6 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
KRTAP3-3Q9BYR6 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC11□□□□□ -0.65
KRTAP3-3Q9BYR6 ANKRD20A17P-201ENST00000511745 1330 ntBASIC11□□□□□ -0.65
KRTAP3-3Q9BYR6 AC008432.1-201ENST00000615912 1320 ntBASIC11□□□□□ -0.65
KRTAP3-3Q9BYR6 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
KRTAP3-3Q9BYR6 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
KRTAP3-3Q9BYR6 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC11□□□□□ -0.65
KRTAP3-3Q9BYR6 AC111188.2-201ENST00000529697 1387 ntBASIC11□□□□□ -0.65
KRTAP3-3Q9BYR6 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC11□□□□□ -0.65
KRTAP3-3Q9BYR6 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
KRTAP3-3Q9BYR6 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC10.99□□□□□ -0.65
KRTAP3-3Q9BYR6 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
KRTAP3-3Q9BYR6 LIMD1-AS1-201ENST00000427644 1536 ntTSL 3 BASIC10.99□□□□□ -0.65
KRTAP3-3Q9BYR6 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
KRTAP3-3Q9BYR6 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC10.99□□□□□ -0.65
KRTAP3-3Q9BYR6 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC10.99□□□□□ -0.65
KRTAP3-3Q9BYR6 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
KRTAP3-3Q9BYR6 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
KRTAP3-3Q9BYR6 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC10.99□□□□□ -0.65
KRTAP3-3Q9BYR6 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
KRTAP3-3Q9BYR6 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
KRTAP3-3Q9BYR6 NSA2-201ENST00000296802 1199 ntTSL 5 BASIC10.99□□□□□ -0.65
KRTAP3-3Q9BYR6 CAPN3-202ENST00000337571 1271 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
KRTAP3-3Q9BYR6 CLYBL-201ENST00000339105 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
KRTAP3-3Q9BYR6 MCTS1-201ENST00000371315 1130 ntTSL 2 BASIC10.99□□□□□ -0.65
KRTAP3-3Q9BYR6 TPT1-203ENST00000379056 1101 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
KRTAP3-3Q9BYR6 TPT1-204ENST00000379060 764 ntTSL 5 BASIC10.99□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms