Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCM2Q9BSQ5 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCM2Q9BSQ5 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCM2Q9BSQ5 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCM2Q9BSQ5 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.25■□□□□ 0.35
CCM2Q9BSQ5 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCM2Q9BSQ5 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCM2Q9BSQ5 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCM2Q9BSQ5 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCM2Q9BSQ5 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
CCM2Q9BSQ5 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.25■□□□□ 0.35
CCM2Q9BSQ5 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.25■□□□□ 0.35
CCM2Q9BSQ5 SAPCD2P3-201ENST00000455031 850 ntBASIC17.25■□□□□ 0.35
CCM2Q9BSQ5 STK25P1-201ENST00000585406 838 ntBASIC17.25■□□□□ 0.35
CCM2Q9BSQ5 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCM2Q9BSQ5 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCM2Q9BSQ5 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCM2Q9BSQ5 AP001269.4-201ENST00000609611 512 ntBASIC17.25■□□□□ 0.35
CCM2Q9BSQ5 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.25■□□□□ 0.35
CCM2Q9BSQ5 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCM2Q9BSQ5 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCM2Q9BSQ5 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCM2Q9BSQ5 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.25■□□□□ 0.35
CCM2Q9BSQ5 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.25■□□□□ 0.35
CCM2Q9BSQ5 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCM2Q9BSQ5 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCM2Q9BSQ5 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCM2Q9BSQ5 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
CCM2Q9BSQ5 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCM2Q9BSQ5 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCM2Q9BSQ5 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCM2Q9BSQ5 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.25■□□□□ 0.35
CCM2Q9BSQ5 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.25■□□□□ 0.35
CCM2Q9BSQ5 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCM2Q9BSQ5 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCM2Q9BSQ5 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCM2Q9BSQ5 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCM2Q9BSQ5 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CCM2Q9BSQ5 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCM2Q9BSQ5 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
CCM2Q9BSQ5 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCM2Q9BSQ5 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.24■□□□□ 0.35
CCM2Q9BSQ5 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCM2Q9BSQ5 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCM2Q9BSQ5 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCM2Q9BSQ5 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCM2Q9BSQ5 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.24■□□□□ 0.35
CCM2Q9BSQ5 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCM2Q9BSQ5 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.24■□□□□ 0.35
CCM2Q9BSQ5 AC106795.1-205ENST00000512851 1056 ntBASIC17.24■□□□□ 0.35
CCM2Q9BSQ5 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.24■□□□□ 0.35
CCM2Q9BSQ5 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.24■□□□□ 0.35
CCM2Q9BSQ5 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CCM2Q9BSQ5 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.24■□□□□ 0.35
CCM2Q9BSQ5 RN7SL510P-201ENST00000581311 263 ntBASIC17.24■□□□□ 0.35
CCM2Q9BSQ5 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCM2Q9BSQ5 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.24■□□□□ 0.35
CCM2Q9BSQ5 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.24■□□□□ 0.35
CCM2Q9BSQ5 AL139327.4-201ENST00000612362 153 ntBASIC17.24■□□□□ 0.35
CCM2Q9BSQ5 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCM2Q9BSQ5 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CCM2Q9BSQ5 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
CCM2Q9BSQ5 LINC00896-202ENST00000609602 2128 ntBASIC17.24■□□□□ 0.35
CCM2Q9BSQ5 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.24■□□□□ 0.35
CCM2Q9BSQ5 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCM2Q9BSQ5 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCM2Q9BSQ5 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCM2Q9BSQ5 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCM2Q9BSQ5 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.24■□□□□ 0.35
CCM2Q9BSQ5 AC132938.5-201ENST00000624980 1813 ntBASIC17.24■□□□□ 0.35
CCM2Q9BSQ5 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.24■□□□□ 0.35
CCM2Q9BSQ5 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.24■□□□□ 0.35
CCM2Q9BSQ5 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCM2Q9BSQ5 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.23■□□□□ 0.35
CCM2Q9BSQ5 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.23■□□□□ 0.35
CCM2Q9BSQ5 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCM2Q9BSQ5 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCM2Q9BSQ5 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CCM2Q9BSQ5 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCM2Q9BSQ5 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.23■□□□□ 0.35
CCM2Q9BSQ5 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCM2Q9BSQ5 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.23■□□□□ 0.35
CCM2Q9BSQ5 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCM2Q9BSQ5 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCM2Q9BSQ5 AC003669.1-201ENST00000334569 611 ntBASIC17.23■□□□□ 0.35
CCM2Q9BSQ5 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCM2Q9BSQ5 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCM2Q9BSQ5 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
CCM2Q9BSQ5 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCM2Q9BSQ5 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.23■□□□□ 0.35
CCM2Q9BSQ5 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.23■□□□□ 0.35
CCM2Q9BSQ5 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.23■□□□□ 0.35
CCM2Q9BSQ5 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.23■□□□□ 0.35
CCM2Q9BSQ5 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.23■□□□□ 0.35
CCM2Q9BSQ5 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.23■□□□□ 0.35
CCM2Q9BSQ5 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CCM2Q9BSQ5 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.23■□□□□ 0.35
CCM2Q9BSQ5 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.23■□□□□ 0.35
CCM2Q9BSQ5 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCM2Q9BSQ5 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms