Protein–RNA interactions for Protein: Q9BS92

NIPSNAP3B, Protein NipSnap homolog 3B, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP3BQ9BS92 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
NIPSNAP3BQ9BS92 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
NIPSNAP3BQ9BS92 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
NIPSNAP3BQ9BS92 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NIPSNAP3BQ9BS92 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
NIPSNAP3BQ9BS92 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NIPSNAP3BQ9BS92 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
NIPSNAP3BQ9BS92 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NIPSNAP3BQ9BS92 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
NIPSNAP3BQ9BS92 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.07□□□□□ -0.16
NIPSNAP3BQ9BS92 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NIPSNAP3BQ9BS92 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NIPSNAP3BQ9BS92 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
NIPSNAP3BQ9BS92 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NIPSNAP3BQ9BS92 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NIPSNAP3BQ9BS92 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
NIPSNAP3BQ9BS92 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC14.07□□□□□ -0.16
NIPSNAP3BQ9BS92 SERF2-207ENST00000409614 582 ntTSL 2 BASIC14.07□□□□□ -0.16
NIPSNAP3BQ9BS92 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC14.07□□□□□ -0.16
NIPSNAP3BQ9BS92 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
NIPSNAP3BQ9BS92 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC14.07□□□□□ -0.16
NIPSNAP3BQ9BS92 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC14.07□□□□□ -0.16
NIPSNAP3BQ9BS92 AL160286.2-201ENST00000567150 934 ntBASIC14.07□□□□□ -0.16
NIPSNAP3BQ9BS92 C1QL1P1-201ENST00000568105 661 ntBASIC14.07□□□□□ -0.16
NIPSNAP3BQ9BS92 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC14.07□□□□□ -0.16
NIPSNAP3BQ9BS92 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.07□□□□□ -0.16
NIPSNAP3BQ9BS92 Six3os1_6.1-201ENST00000620790 196 ntBASIC14.07□□□□□ -0.16
NIPSNAP3BQ9BS92 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC14.07□□□□□ -0.16
NIPSNAP3BQ9BS92 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NIPSNAP3BQ9BS92 MIR600HG-201ENST00000449175 5984 ntBASIC14.07□□□□□ -0.16
NIPSNAP3BQ9BS92 AC132872.4-202ENST00000622924 2756 ntBASIC14.07□□□□□ -0.16
NIPSNAP3BQ9BS92 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NIPSNAP3BQ9BS92 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
NIPSNAP3BQ9BS92 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
NIPSNAP3BQ9BS92 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
NIPSNAP3BQ9BS92 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NIPSNAP3BQ9BS92 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.07□□□□□ -0.16
NIPSNAP3BQ9BS92 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC14.07□□□□□ -0.16
NIPSNAP3BQ9BS92 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
NIPSNAP3BQ9BS92 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NIPSNAP3BQ9BS92 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
NIPSNAP3BQ9BS92 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.07□□□□□ -0.16
NIPSNAP3BQ9BS92 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC14.07□□□□□ -0.16
NIPSNAP3BQ9BS92 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
NIPSNAP3BQ9BS92 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NIPSNAP3BQ9BS92 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC14.06□□□□□ -0.16
NIPSNAP3BQ9BS92 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NIPSNAP3BQ9BS92 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NIPSNAP3BQ9BS92 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NIPSNAP3BQ9BS92 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NIPSNAP3BQ9BS92 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NIPSNAP3BQ9BS92 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC14.06□□□□□ -0.16
NIPSNAP3BQ9BS92 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
NIPSNAP3BQ9BS92 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
NIPSNAP3BQ9BS92 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
NIPSNAP3BQ9BS92 AC007950.2-201ENST00000615045 2347 ntBASIC14.06□□□□□ -0.16
NIPSNAP3BQ9BS92 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NIPSNAP3BQ9BS92 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NIPSNAP3BQ9BS92 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC14.06□□□□□ -0.16
NIPSNAP3BQ9BS92 DET1-205ENST00000558413 583 ntTSL 4 BASIC14.06□□□□□ -0.16
NIPSNAP3BQ9BS92 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC14.06□□□□□ -0.16
NIPSNAP3BQ9BS92 AC066615.1-201ENST00000640911 628 ntBASIC14.06□□□□□ -0.16
NIPSNAP3BQ9BS92 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC14.06□□□□□ -0.16
NIPSNAP3BQ9BS92 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC14.06□□□□□ -0.16
NIPSNAP3BQ9BS92 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NIPSNAP3BQ9BS92 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
NIPSNAP3BQ9BS92 MME-217ENST00000616757 1315 ntTSL 5 BASIC14.06□□□□□ -0.16
NIPSNAP3BQ9BS92 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NIPSNAP3BQ9BS92 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NIPSNAP3BQ9BS92 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
NIPSNAP3BQ9BS92 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NIPSNAP3BQ9BS92 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
NIPSNAP3BQ9BS92 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NIPSNAP3BQ9BS92 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC14.06□□□□□ -0.16
NIPSNAP3BQ9BS92 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NIPSNAP3BQ9BS92 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC14.06□□□□□ -0.16
NIPSNAP3BQ9BS92 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NIPSNAP3BQ9BS92 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NIPSNAP3BQ9BS92 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
NIPSNAP3BQ9BS92 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NIPSNAP3BQ9BS92 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
NIPSNAP3BQ9BS92 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC14.06□□□□□ -0.16
NIPSNAP3BQ9BS92 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
NIPSNAP3BQ9BS92 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
NIPSNAP3BQ9BS92 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NIPSNAP3BQ9BS92 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
NIPSNAP3BQ9BS92 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NIPSNAP3BQ9BS92 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NIPSNAP3BQ9BS92 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC14.05□□□□□ -0.16
NIPSNAP3BQ9BS92 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NIPSNAP3BQ9BS92 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NIPSNAP3BQ9BS92 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NIPSNAP3BQ9BS92 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC14.05□□□□□ -0.16
NIPSNAP3BQ9BS92 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC14.05□□□□□ -0.16
NIPSNAP3BQ9BS92 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
NIPSNAP3BQ9BS92 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
NIPSNAP3BQ9BS92 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC14.05□□□□□ -0.16
NIPSNAP3BQ9BS92 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NIPSNAP3BQ9BS92 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NIPSNAP3BQ9BS92 MIR718-201ENST00000390190 70 ntBASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms