Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SPENQ96T58 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SPENQ96T58 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SPENQ96T58 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC15.65■□□□□ 0.1
SPENQ96T58 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC15.65■□□□□ 0.1
SPENQ96T58 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
SPENQ96T58 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC15.65■□□□□ 0.1
SPENQ96T58 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC15.65■□□□□ 0.1
SPENQ96T58 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
SPENQ96T58 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.65■□□□□ 0.1
SPENQ96T58 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC15.65■□□□□ 0.1
SPENQ96T58 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
SPENQ96T58 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC15.65■□□□□ 0.1
SPENQ96T58 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC15.65■□□□□ 0.1
SPENQ96T58 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.65■□□□□ 0.1
SPENQ96T58 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC15.65■□□□□ 0.1
SPENQ96T58 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SPENQ96T58 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SPENQ96T58 PTCHD3P3-201ENST00000403073 906 ntBASIC15.65■□□□□ 0.1
SPENQ96T58 FAM58CP-201ENST00000435741 640 ntBASIC15.65■□□□□ 0.1
SPENQ96T58 SMN2-210ENST00000511812 867 ntTSL 2 BASIC15.65■□□□□ 0.1
SPENQ96T58 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC15.65■□□□□ 0.1
SPENQ96T58 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SPENQ96T58 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
SPENQ96T58 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SPENQ96T58 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SPENQ96T58 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SPENQ96T58 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SPENQ96T58 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC15.65■□□□□ 0.1
SPENQ96T58 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
SPENQ96T58 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SPENQ96T58 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
SPENQ96T58 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.65■□□□□ 0.1
SPENQ96T58 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SPENQ96T58 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC15.65■□□□□ 0.1
SPENQ96T58 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
SPENQ96T58 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC15.65■□□□□ 0.1
SPENQ96T58 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
SPENQ96T58 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC15.65■□□□□ 0.1
SPENQ96T58 AC023141.13-201ENST00000604991 943 ntBASIC15.65■□□□□ 0.1
SPENQ96T58 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
SPENQ96T58 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
SPENQ96T58 AL020996.1-203ENST00000536896 2307 ntBASIC15.64■□□□□ 0.1
SPENQ96T58 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC15.64■□□□□ 0.09
SPENQ96T58 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SPENQ96T58 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SPENQ96T58 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SPENQ96T58 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SPENQ96T58 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.64■□□□□ 0.09
SPENQ96T58 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SPENQ96T58 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15.64■□□□□ 0.09
SPENQ96T58 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SPENQ96T58 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SPENQ96T58 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SPENQ96T58 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
SPENQ96T58 GK-202ENST00000378941 458 ntTSL 3 BASIC15.64■□□□□ 0.09
SPENQ96T58 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC15.64■□□□□ 0.09
SPENQ96T58 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
SPENQ96T58 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SPENQ96T58 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SPENQ96T58 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SPENQ96T58 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC15.64■□□□□ 0.09
SPENQ96T58 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
SPENQ96T58 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC15.64■□□□□ 0.09
SPENQ96T58 TUBB3P1-201ENST00000405796 1332 ntBASIC15.64■□□□□ 0.09
SPENQ96T58 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SPENQ96T58 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SPENQ96T58 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
SPENQ96T58 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SPENQ96T58 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC15.64■□□□□ 0.09
SPENQ96T58 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC15.64■□□□□ 0.09
SPENQ96T58 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC15.64■□□□□ 0.09
SPENQ96T58 MED16-214ENST00000617672 554 ntTSL 5 BASIC15.64■□□□□ 0.09
SPENQ96T58 REXO1L3P-201ENST00000622202 1288 ntBASIC15.64■□□□□ 0.09
SPENQ96T58 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SPENQ96T58 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SPENQ96T58 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SPENQ96T58 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.63■□□□□ 0.09
SPENQ96T58 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.63■□□□□ 0.09
SPENQ96T58 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SPENQ96T58 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
SPENQ96T58 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SPENQ96T58 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SPENQ96T58 PI4KAP1-204ENST00000612579 1703 ntBASIC15.63■□□□□ 0.09
SPENQ96T58 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SPENQ96T58 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SPENQ96T58 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
SPENQ96T58 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
SPENQ96T58 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SPENQ96T58 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
SPENQ96T58 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
SPENQ96T58 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SPENQ96T58 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC15.63■□□□□ 0.09
SPENQ96T58 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC15.63■□□□□ 0.09
SPENQ96T58 DUX4L17-201ENST00000557360 1267 ntBASIC15.63■□□□□ 0.09
SPENQ96T58 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SPENQ96T58 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SPENQ96T58 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC15.63■□□□□ 0.09
SPENQ96T58 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SPENQ96T58 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms