Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC14.57□□□□□ -0.08
GAFA1Q96PS6 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
GAFA1Q96PS6 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
GAFA1Q96PS6 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GAFA1Q96PS6 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
GAFA1Q96PS6 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GAFA1Q96PS6 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC14.57□□□□□ -0.08
GAFA1Q96PS6 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
GAFA1Q96PS6 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC14.57□□□□□ -0.08
GAFA1Q96PS6 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
GAFA1Q96PS6 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC14.57□□□□□ -0.08
GAFA1Q96PS6 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC14.57□□□□□ -0.08
GAFA1Q96PS6 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
GAFA1Q96PS6 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC14.56□□□□□ -0.08
GAFA1Q96PS6 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
GAFA1Q96PS6 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GAFA1Q96PS6 TPR-209ENST00000613151 2478 ntTSL 5 BASIC14.56□□□□□ -0.08
GAFA1Q96PS6 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GAFA1Q96PS6 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GAFA1Q96PS6 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
GAFA1Q96PS6 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GAFA1Q96PS6 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
GAFA1Q96PS6 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
GAFA1Q96PS6 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GAFA1Q96PS6 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC14.56□□□□□ -0.08
GAFA1Q96PS6 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
GAFA1Q96PS6 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
GAFA1Q96PS6 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GAFA1Q96PS6 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GAFA1Q96PS6 ENSA-206ENST00000361631 725 ntTSL 2 BASIC14.56□□□□□ -0.08
GAFA1Q96PS6 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC14.56□□□□□ -0.08
GAFA1Q96PS6 SPDYE21P-201ENST00000413323 827 ntBASIC14.56□□□□□ -0.08
GAFA1Q96PS6 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC14.56□□□□□ -0.08
GAFA1Q96PS6 SAPCD2P3-201ENST00000455031 850 ntBASIC14.56□□□□□ -0.08
GAFA1Q96PS6 COX5A-202ENST00000562233 441 ntTSL 3 BASIC14.56□□□□□ -0.08
GAFA1Q96PS6 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
GAFA1Q96PS6 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC14.56□□□□□ -0.08
GAFA1Q96PS6 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
GAFA1Q96PS6 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC14.56□□□□□ -0.08
GAFA1Q96PS6 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
GAFA1Q96PS6 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
GAFA1Q96PS6 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
GAFA1Q96PS6 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC14.56□□□□□ -0.08
GAFA1Q96PS6 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
GAFA1Q96PS6 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GAFA1Q96PS6 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC14.56□□□□□ -0.08
GAFA1Q96PS6 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GAFA1Q96PS6 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
GAFA1Q96PS6 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GAFA1Q96PS6 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GAFA1Q96PS6 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
GAFA1Q96PS6 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
GAFA1Q96PS6 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC14.55□□□□□ -0.08
GAFA1Q96PS6 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
GAFA1Q96PS6 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
GAFA1Q96PS6 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
GAFA1Q96PS6 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
GAFA1Q96PS6 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC14.55□□□□□ -0.08
GAFA1Q96PS6 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC14.55□□□□□ -0.08
GAFA1Q96PS6 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
GAFA1Q96PS6 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
GAFA1Q96PS6 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC14.55□□□□□ -0.08
GAFA1Q96PS6 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
GAFA1Q96PS6 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
GAFA1Q96PS6 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC14.55□□□□□ -0.08
GAFA1Q96PS6 AL020989.1-201ENST00000422979 469 ntBASIC14.55□□□□□ -0.08
GAFA1Q96PS6 AL450487.1-201ENST00000426799 995 ntBASIC14.55□□□□□ -0.08
GAFA1Q96PS6 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
GAFA1Q96PS6 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC14.55□□□□□ -0.08
GAFA1Q96PS6 MTDHP3-201ENST00000594186 672 ntBASIC14.55□□□□□ -0.08
GAFA1Q96PS6 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
GAFA1Q96PS6 AC008608.2-201ENST00000606089 416 ntBASIC14.55□□□□□ -0.08
GAFA1Q96PS6 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
GAFA1Q96PS6 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC14.55□□□□□ -0.08
GAFA1Q96PS6 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
GAFA1Q96PS6 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
GAFA1Q96PS6 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC14.55□□□□□ -0.08
GAFA1Q96PS6 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
GAFA1Q96PS6 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC14.55□□□□□ -0.08
GAFA1Q96PS6 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
GAFA1Q96PS6 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
GAFA1Q96PS6 AC148477.5-201ENST00000625164 1645 ntBASIC14.55□□□□□ -0.08
GAFA1Q96PS6 AC079776.2-201ENST00000641154 1609 ntBASIC14.55□□□□□ -0.08
GAFA1Q96PS6 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
GAFA1Q96PS6 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC14.55□□□□□ -0.08
GAFA1Q96PS6 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
GAFA1Q96PS6 OR6D1P-202ENST00000641007 5290 ntBASIC14.55□□□□□ -0.08
GAFA1Q96PS6 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
GAFA1Q96PS6 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
GAFA1Q96PS6 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC14.55□□□□□ -0.08
GAFA1Q96PS6 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
GAFA1Q96PS6 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
GAFA1Q96PS6 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
GAFA1Q96PS6 CROCCP2-202ENST00000412962 2773 ntBASIC14.54□□□□□ -0.08
GAFA1Q96PS6 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC14.54□□□□□ -0.08
GAFA1Q96PS6 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
GAFA1Q96PS6 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
GAFA1Q96PS6 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC14.54□□□□□ -0.08
GAFA1Q96PS6 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
GAFA1Q96PS6 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms