Protein–RNA interactions for Protein: Q969H4

CNKSR1, Connector enhancer of kinase suppressor of ras 1, humanhuman

Predictions only

Length 720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1Q969H4 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CNKSR1Q969H4 AC093677.2-201ENST00000600169 1863 ntBASIC21.29■■□□□ 1
CNKSR1Q969H4 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC21.29■■□□□ 1
CNKSR1Q969H4 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC21.29■■□□□ 1
CNKSR1Q969H4 HNRNPA1P40-201ENST00000426371 1278 ntBASIC21.29■■□□□ 1
CNKSR1Q969H4 FAM58DP-201ENST00000428076 619 ntBASIC21.29■■□□□ 1
CNKSR1Q969H4 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
CNKSR1Q969H4 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
CNKSR1Q969H4 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC21.29■■□□□ 1
CNKSR1Q969H4 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC21.29■■□□□ 1
CNKSR1Q969H4 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CNKSR1Q969H4 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC21.29■■□□□ 1
CNKSR1Q969H4 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC21.29■■□□□ 1
CNKSR1Q969H4 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC21.29■■□□□ 1
CNKSR1Q969H4 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC21.29■■□□□ 1
CNKSR1Q969H4 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CNKSR1Q969H4 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC21.29■■□□□ 1
CNKSR1Q969H4 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CNKSR1Q969H4 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC21.29■■□□□ 1
CNKSR1Q969H4 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CNKSR1Q969H4 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC21.29■■□□□ 1
CNKSR1Q969H4 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC21.29■■□□□ 1
CNKSR1Q969H4 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CNKSR1Q969H4 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CNKSR1Q969H4 AKAP8P1-201ENST00000434743 1349 ntBASIC21.29■■□□□ 1
CNKSR1Q969H4 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CNKSR1Q969H4 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CNKSR1Q969H4 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CNKSR1Q969H4 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC21.28■■□□□ 1
CNKSR1Q969H4 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CNKSR1Q969H4 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CNKSR1Q969H4 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC21.28■■□□□ 1
CNKSR1Q969H4 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC21.28■■□□□ 1
CNKSR1Q969H4 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
CNKSR1Q969H4 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC21.28■■□□□ 1
CNKSR1Q969H4 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CNKSR1Q969H4 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CNKSR1Q969H4 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC21.28■■□□□ 1
CNKSR1Q969H4 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC21.28■■□□□ 1
CNKSR1Q969H4 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC21.28■■□□□ 1
CNKSR1Q969H4 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC21.28■■□□□ 1
CNKSR1Q969H4 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC21.28■■□□□ 1
CNKSR1Q969H4 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC21.28■■□□□ 1
CNKSR1Q969H4 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC21.28■■□□□ 1
CNKSR1Q969H4 YTHDF3-AS1-201ENST00000603538 718 ntBASIC21.28■■□□□ 1
CNKSR1Q969H4 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CNKSR1Q969H4 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
CNKSR1Q969H4 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC21.28■■□□□ 1
CNKSR1Q969H4 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC21.28■■□□□ 1
CNKSR1Q969H4 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CNKSR1Q969H4 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
CNKSR1Q969H4 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CNKSR1Q969H4 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC21.28■■□□□ 1
CNKSR1Q969H4 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CNKSR1Q969H4 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.27■■□□□ 1
CNKSR1Q969H4 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC21.27■■□□□ 1
CNKSR1Q969H4 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC21.27■■□□□ 1
CNKSR1Q969H4 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC21.27■■□□□ 1
CNKSR1Q969H4 AC107890.1-201ENST00000422478 521 ntBASIC21.27■■□□□ 1
CNKSR1Q969H4 GPS2P2-201ENST00000430745 888 ntBASIC21.27■■□□□ 1
CNKSR1Q969H4 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
CNKSR1Q969H4 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC21.27■■□□□ 1
CNKSR1Q969H4 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC21.27■■□□□ 1
CNKSR1Q969H4 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CNKSR1Q969H4 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC21.27■■□□□ 1
CNKSR1Q969H4 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CNKSR1Q969H4 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC21.27■■□□□ 1
CNKSR1Q969H4 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CNKSR1Q969H4 AL135999.2-201ENST00000622438 1686 ntBASIC21.27■■□□□ 1
CNKSR1Q969H4 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
CNKSR1Q969H4 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC21.27■■□□□ 1
CNKSR1Q969H4 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
CNKSR1Q969H4 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC21.27■□□□□ 0.99
CNKSR1Q969H4 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
CNKSR1Q969H4 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC21.26■□□□□ 0.99
CNKSR1Q969H4 POR-209ENST00000439269 1858 ntTSL 2 BASIC21.26■□□□□ 0.99
CNKSR1Q969H4 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
CNKSR1Q969H4 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC21.26■□□□□ 0.99
CNKSR1Q969H4 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CNKSR1Q969H4 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CNKSR1Q969H4 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC21.26■□□□□ 0.99
CNKSR1Q969H4 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC21.26■□□□□ 0.99
CNKSR1Q969H4 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
CNKSR1Q969H4 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CNKSR1Q969H4 MIR661-201ENST00000384842 89 ntBASIC21.26■□□□□ 0.99
CNKSR1Q969H4 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC21.26■□□□□ 0.99
CNKSR1Q969H4 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
CNKSR1Q969H4 CENPM-205ENST00000404067 905 ntTSL 3 BASIC21.26■□□□□ 0.99
CNKSR1Q969H4 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
CNKSR1Q969H4 THTPA-204ENST00000554970 569 ntTSL 4 BASIC21.26■□□□□ 0.99
CNKSR1Q969H4 THTPA-206ENST00000556015 535 ntTSL 3 BASIC21.26■□□□□ 0.99
CNKSR1Q969H4 AL135744.1-201ENST00000565098 629 ntBASIC21.26■□□□□ 0.99
CNKSR1Q969H4 RARRES2P8-201ENST00000566335 367 ntBASIC21.26■□□□□ 0.99
CNKSR1Q969H4 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC21.26■□□□□ 0.99
CNKSR1Q969H4 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CNKSR1Q969H4 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CNKSR1Q969H4 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
CNKSR1Q969H4 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
CNKSR1Q969H4 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC21.26■□□□□ 0.99
CNKSR1Q969H4 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms