Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC20.61■□□□□ 0.89
STAG1Q8WVM7 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
STAG1Q8WVM7 BOC-212ENST00000485230 2173 ntTSL 2 BASIC20.61■□□□□ 0.89
STAG1Q8WVM7 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
STAG1Q8WVM7 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
STAG1Q8WVM7 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
STAG1Q8WVM7 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
STAG1Q8WVM7 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
STAG1Q8WVM7 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC20.6■□□□□ 0.89
STAG1Q8WVM7 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC20.6■□□□□ 0.89
STAG1Q8WVM7 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
STAG1Q8WVM7 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
STAG1Q8WVM7 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC20.6■□□□□ 0.89
STAG1Q8WVM7 TPR-209ENST00000613151 2478 ntTSL 5 BASIC20.6■□□□□ 0.89
STAG1Q8WVM7 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC20.6■□□□□ 0.89
STAG1Q8WVM7 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
STAG1Q8WVM7 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
STAG1Q8WVM7 RAB17-203ENST00000409576 466 ntTSL 3 BASIC20.6■□□□□ 0.89
STAG1Q8WVM7 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC20.6■□□□□ 0.89
STAG1Q8WVM7 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC20.6■□□□□ 0.89
STAG1Q8WVM7 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC20.6■□□□□ 0.89
STAG1Q8WVM7 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC20.6■□□□□ 0.89
STAG1Q8WVM7 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC20.6■□□□□ 0.89
STAG1Q8WVM7 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC20.6■□□□□ 0.89
STAG1Q8WVM7 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC20.6■□□□□ 0.89
STAG1Q8WVM7 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC20.6■□□□□ 0.89
STAG1Q8WVM7 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
STAG1Q8WVM7 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
STAG1Q8WVM7 AL135999.2-201ENST00000622438 1686 ntBASIC20.6■□□□□ 0.89
STAG1Q8WVM7 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
STAG1Q8WVM7 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
STAG1Q8WVM7 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
STAG1Q8WVM7 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
STAG1Q8WVM7 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.6■□□□□ 0.89
STAG1Q8WVM7 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
STAG1Q8WVM7 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC20.6■□□□□ 0.89
STAG1Q8WVM7 GID4-202ENST00000376345 1391 ntTSL 3 BASIC20.59■□□□□ 0.89
STAG1Q8WVM7 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
STAG1Q8WVM7 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
STAG1Q8WVM7 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC20.59■□□□□ 0.89
STAG1Q8WVM7 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
STAG1Q8WVM7 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
STAG1Q8WVM7 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
STAG1Q8WVM7 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
STAG1Q8WVM7 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
STAG1Q8WVM7 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
STAG1Q8WVM7 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
STAG1Q8WVM7 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC20.59■□□□□ 0.89
STAG1Q8WVM7 AL590627.1-203ENST00000421194 1026 ntBASIC20.59■□□□□ 0.89
STAG1Q8WVM7 S100A2-206ENST00000497140 697 ntTSL 2 BASIC20.59■□□□□ 0.89
STAG1Q8WVM7 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC20.59■□□□□ 0.89
STAG1Q8WVM7 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC20.59■□□□□ 0.89
STAG1Q8WVM7 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC20.59■□□□□ 0.89
STAG1Q8WVM7 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
STAG1Q8WVM7 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
STAG1Q8WVM7 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC20.59■□□□□ 0.89
STAG1Q8WVM7 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
STAG1Q8WVM7 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
STAG1Q8WVM7 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
STAG1Q8WVM7 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
STAG1Q8WVM7 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC20.59■□□□□ 0.89
STAG1Q8WVM7 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
STAG1Q8WVM7 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
STAG1Q8WVM7 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
STAG1Q8WVM7 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
STAG1Q8WVM7 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
STAG1Q8WVM7 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
STAG1Q8WVM7 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
STAG1Q8WVM7 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
STAG1Q8WVM7 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
STAG1Q8WVM7 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC20.58■□□□□ 0.89
STAG1Q8WVM7 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC20.58■□□□□ 0.89
STAG1Q8WVM7 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
STAG1Q8WVM7 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
STAG1Q8WVM7 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
STAG1Q8WVM7 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
STAG1Q8WVM7 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
STAG1Q8WVM7 TEX30-205ENST00000376029 959 ntTSL 2 BASIC20.58■□□□□ 0.89
STAG1Q8WVM7 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC20.58■□□□□ 0.89
STAG1Q8WVM7 MSRA-206ENST00000521209 814 ntTSL 3 BASIC20.58■□□□□ 0.89
STAG1Q8WVM7 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
STAG1Q8WVM7 CYGB-205ENST00000590175 830 ntTSL 3 BASIC20.58■□□□□ 0.89
STAG1Q8WVM7 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC20.58■□□□□ 0.89
STAG1Q8WVM7 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC20.58■□□□□ 0.89
STAG1Q8WVM7 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
STAG1Q8WVM7 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC20.58■□□□□ 0.88
STAG1Q8WVM7 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
STAG1Q8WVM7 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
STAG1Q8WVM7 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
STAG1Q8WVM7 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
STAG1Q8WVM7 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
STAG1Q8WVM7 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
STAG1Q8WVM7 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
STAG1Q8WVM7 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
STAG1Q8WVM7 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC20.57■□□□□ 0.88
STAG1Q8WVM7 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC20.57■□□□□ 0.88
STAG1Q8WVM7 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC20.57■□□□□ 0.88
STAG1Q8WVM7 RPS2P1-201ENST00000434010 821 ntBASIC20.57■□□□□ 0.88
STAG1Q8WVM7 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
STAG1Q8WVM7 AC120114.3-201ENST00000611923 658 ntBASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms